RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ALG12Q9BV10 488 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 ZNF747Q9BV97 191 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 OR2J1Q9GZK6 312 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 TXNIPQ9H3M7 391 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 SH3GLB1Q9Y371 365 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 MED31Q9Y3C7 131 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 TIMM10BQ9Y5J6 103 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 CACNG2Q9Y698 323 aa14.42□□□□□ -0.1
PNKP-210ENST00000597965 SLC2A10O95528 541 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 CST2P09228 141 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 HKR1P10072 659 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 MAKP20794 623 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 GSTM3P21266 225 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 AQP2P41181 271 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 PPP1CBP62140 327 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 LCN2P80188 198 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 PSG4Q00888 419 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 CYLC2Q14093 348 aaPredicted RBP14.41□□□□□ -0.1
PNKP-210ENST00000597965 VMACQ2NL98 169 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 SPATA46Q5T0L3 261 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 ARMC4Q5T2S8 1044 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 TRPM8Q7Z2W7 1104 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 ZDHHC22Q8N966 263 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 OR4D11Q8NGI4 311 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 OR10A6Q8NH74 314 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 ABHD4Q8TB40 342 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 NABP1Q96AH0 204 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 TAMM41Q96BW9 452 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 ZNF696Q9H7X3 374 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 MRGBPQ9NV56 204 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 NDRG4Q9ULP0 352 aaKnown RBP14.41□□□□□ -0.1
PNKP-210ENST00000597965 NPTNQ9Y639 398 aa14.41□□□□□ -0.1
PNKP-210ENST00000597965 TIMM8AO60220 97 aaPredicted RBP14.4□□□□□ -0.1
PNKP-210ENST00000597965 FSHBP01225 129 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 TSPAN19P0C672 248 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 CPT2P23786 658 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 CDAP32320 146 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 WNT5AP41221 380 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 ERVK-25P63136 954 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 TNFAIP6P98066 277 aaPredicted RBP14.4□□□□□ -0.1
PNKP-210ENST00000597965 ALG10Q5BKT4 473 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 MTX3Q5HYI7 312 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 CCDC121Q6ZUS5 278 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 SYT9Q86SS6 491 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 NPEPL1Q8NDH3 523 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 NSMAFQ92636 917 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 GTF3AQ92664 365 aaKnown RBP14.4□□□□□ -0.1
PNKP-210ENST00000597965 COG8Q96MW5 612 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 MRI1Q9BV20 369 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 ESM1Q9NQ30 184 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 OPN4Q9UHM6 478 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 RIMS3Q9UJD0 308 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 KLHL21Q9UJP4 597 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 NUP50Q9UKX7 468 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 POLR3KQ9Y2Y1 108 aaPredicted RBP14.4□□□□□ -0.1
PNKP-210ENST00000597965 UGT2A1Q9Y4X1 527 aa14.4□□□□□ -0.1
PNKP-210ENST00000597965 LOC100509620A0A075B734 347 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 ZSCAN5BA6NJL1 495 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 C12orf71A8MTZ7 269 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 SURF4O15260 269 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 IGHMP01871 453 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 PRTN3P24158 256 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 MPV17P39210 176 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 SELPLGQ14242 412 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 ANKDD1AQ495B1 522 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 TMEM155Q4W5P6 130 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 DOK3Q7L591 496 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 TSPYL5Q86VY4 417 aaPredicted RBP14.39□□□□□ -0.11
PNKP-210ENST00000597965 AKR7LQ8NHP1 331 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 PFN4Q8NHR9 129 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 TMEM255BQ8WV15 326 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 HDAC2Q92769 488 aaKnown RBP14.39□□□□□ -0.11
PNKP-210ENST00000597965 DVL3Q92997 716 aaPredicted RBP14.39□□□□□ -0.11
PNKP-210ENST00000597965 SLC25A28Q96A46 364 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 NMD3Q96D46 503 aaKnown RBP14.39□□□□□ -0.11
PNKP-210ENST00000597965 C4orf45Q96LM5 186 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 ECSITQ9BQ95 431 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 SIKE1Q9BRV8 207 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 TMEM120AQ9BXJ8 343 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 OR2H1Q9GZK4 316 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 MAN2C1Q9NTJ4 1040 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 PLEK2Q9NYT0 353 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 PURGQ9UJV8 347 aaKnown RBP14.39□□□□□ -0.11
PNKP-210ENST00000597965 HIF3AQ9Y2N7 669 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 PPIAL4AQ9Y536 164 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 AUP1Q9Y679 476 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 TANC2Q9HCD6 1990 aa14.39□□□□□ -0.11
PNKP-210ENST00000597965 A6NIZ1 184 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 SBK2P0C263 348 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 LAP3P28838 519 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 RAP1BP61224 184 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 RPL27P61353 136 aaKnown RBP14.38□□□□□ -0.11
PNKP-210ENST00000597965 RAP1AP62834 184 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 ST3GAL3Q11203 375 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 METTL21CQ5VZV1 264 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 ERICH5Q6P6B1 374 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 SLC25A47Q6Q0C1 308 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 NKAIN4Q8IVV8 208 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 FITM2Q8N6M3 262 aa14.38□□□□□ -0.11
PNKP-210ENST00000597965 C22orf15Q8WYQ4 148 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms