RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 PRDM6Q9NQX0 595 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 SLC23A1Q9UHI7 598 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 HTR2BP41595 481 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 RAD52P43351 418 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 ZNF41P51814 821 aaPredicted RBP20.3■□□□□ 0.84
SRRM1-222ENST00000596378 BIDP55957 195 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 MRPS10P82664 201 aaKnown RBP20.3■□□□□ 0.84
SRRM1-222ENST00000596378 RAB11BQ15907 218 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 OLFML2AQ68BL7 652 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 ANKRD16Q6P6B7 361 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 OR51A2Q8NGJ7 313 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 ST7LQ8TDW4 575 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 SNAPC3Q92966 411 aa20.3■□□□□ 0.84
SRRM1-222ENST00000596378 GGT3PA6NGU5 568 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 MNDAP41218 407 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 EIF1AXP47813 144 aaKnown RBP20.29■□□□□ 0.84
SRRM1-222ENST00000596378 SELENOPP49908 381 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 PLPPR5Q32ZL2 321 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 ELFN2Q5R3F8 820 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 SLC25A25Q6KCM7 469 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 FGD2Q7Z6J4 655 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 ZNF454Q8N9F8 522 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 OR5L2Q8NGL0 311 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 OR1J4Q8NGS1 313 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 RNF138Q8WVD3 245 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 NOX3Q9HBY0 568 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 CGGBP1Q9UFW8 167 aaPredicted RBP20.29■□□□□ 0.84
SRRM1-222ENST00000596378 FBXL2Q9UKC9 423 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 PCDHGA5Q9Y5G8 931 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 R4GMQ9 66 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 EML6Q6ZMW3 1958 aa20.29■□□□□ 0.84
SRRM1-222ENST00000596378 NAP1L6A6NFF2 107 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 CENPBD1B2RD01 187 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 SLC17A2O00624 439 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 ZNF208O43345 1280 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 ZFAND5O76080 213 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 MYBPHQ13203 477 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 PMS2CLQ68D20 193 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 OR6S1Q8NH40 331 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 CDX2Q99626 313 aaPredicted RBP20.28■□□□□ 0.84
SRRM1-222ENST00000596378 G6PC2Q9NQR9 355 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 CENPMQ9NSP4 180 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 PILRBQ9UKJ0 227 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 CDV3Q9UKY7 258 aaKnown RBP20.28■□□□□ 0.84
SRRM1-222ENST00000596378 TRAV18A0A075B6X5 111 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 MEIKINA0A087WXM9 373 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 LDOC1O95751 146 aaPredicted RBP20.28■□□□□ 0.84
SRRM1-222ENST00000596378 ANXA7P20073 488 aaKnown RBP20.28■□□□□ 0.84
SRRM1-222ENST00000596378 MAP2K6P52564 334 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 MFSD13AQ14CX5 517 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 PCGF3Q3KNV8 242 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
SRRM1-222ENST00000596378 MAFAQ8NHW3 353 aaPredicted RBP20.28■□□□□ 0.84
SRRM1-222ENST00000596378 TTC9Q92623 222 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 SLC25A44Q96H78 314 aaPredicted RBP20.28■□□□□ 0.84
SRRM1-222ENST00000596378 GAREM1Q9H706 876 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 SERINC1Q9NRX5 453 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 B3GAT1Q9P2W7 334 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 WIF1Q9Y5W5 379 aa20.28■□□□□ 0.84
SRRM1-222ENST00000596378 TMEM272A0A1B0GTI8 110 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 ERVH48-1M5A8F1 160 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 MEN1O00255 615 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 PDGFBP01127 241 aaPredicted RBP20.27■□□□□ 0.84
SRRM1-222ENST00000596378 CFIP05156 583 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 CELA2AP08217 269 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 ZNF28P17035 718 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 LUZP2Q86TE4 346 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 OR4D10Q8NGI6 311 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 OR13C3Q8NGS6 347 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 ZNF275Q9NSD4 429 aaPredicted RBP20.27■□□□□ 0.84
SRRM1-222ENST00000596378 MYEF2Q9P2K5 600 aaKnown RBP20.27■□□□□ 0.84
SRRM1-222ENST00000596378 OR52A1Q9UKL2 312 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 PHF3Q92576 2039 aaKnown RBP20.27■□□□□ 0.84
SRRM1-222ENST00000596378 TNRC6BQ9UPQ9 1833 aaKnown RBP20.27■□□□□ 0.84
SRRM1-222ENST00000596378 LOC107986453A0A1B0GWG9 222 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 A0A1W2PNR3 127 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 CIB4A0PJX0 185 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 FAM166AQ6J272 317 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 DNM1P34Q6PK57 102 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 TMEM205Q6UW68 189 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 DNM1P46Q6ZS02 220 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 BPHLQ86WA6 291 aaPredicted RBP20.27■□□□□ 0.84
SRRM1-222ENST00000596378 DLL4Q9NR61 685 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 ALKBH4Q9NXW9 302 aa20.27■□□□□ 0.84
SRRM1-222ENST00000596378 LOC100289279A0A1B0GTE1 492 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 TMEM269A0A1B0GVZ9 245 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 DCDC2BA2VCK2 349 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 NAGAP17050 411 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 SCAND1P57086 179 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 SPOCK1Q08629 439 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 GLYATL3Q5SZD4 288 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 RASL10BQ96S79 203 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 RANBP3Q9H6Z4 567 aaPredicted RBP20.26■□□□□ 0.83
SRRM1-222ENST00000596378 PRMT8Q9NR22 394 aaPredicted RBP20.26■□□□□ 0.83
SRRM1-222ENST00000596378 CKLFQ9UBR5 152 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 A0A1W2PPC1 479 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 RBBP9O75884 186 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 CD2P06729 351 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 CREB3L2Q70SY1 520 aa20.26■□□□□ 0.83
SRRM1-222ENST00000596378 IFI44Q8TCB0 444 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms