RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TAS2R41P59536 307 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 GNGT1P63211 74 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 PMS2P3Q13401 168 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 DEFB112Q30KQ8 113 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF362Q5T0B9 420 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 NHLRC1Q6VVB1 395 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 CPLX4Q7Z7G2 160 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 C20orf196Q8IYI0 205 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 PARP8Q8N3A8 854 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 ICA1LQ8NDH6 482 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 OR5J2Q8NH18 312 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 CMTM5Q96DZ9 223 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 DCLRE1CQ96SD1 692 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 SLC19A3Q9BZV2 496 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 MEPEQ9NQ76 525 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 ABCD2Q9UBJ2 740 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 POFUT2Q9Y2G5 429 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 CXCR6O00574 342 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 OR5F1O95221 314 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 CH25HO95992 272 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 GSK3BP49841 420 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 UGT2B15P54855 530 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 SELENOWP63302 87 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 PIN1Q13526 163 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 HLXQ14774 488 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 PXKQ7Z7A4 578 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 NKAIN4Q8IVV8 208 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 SKA3Q8IX90 412 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 TMEM255BQ8WV15 326 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 ELMOD3Q96FG2 381 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 TXNDC15Q96J42 360 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 TPD52L3Q96J77 140 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 CHIAQ9BZP6 476 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 NANSQ9NR45 359 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 SLCO1C1Q9NYB5 712 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF229Q9UJW7 825 aa11.57□□□□□ -0.56
SHKBP1-208ENST00000595726 C11orf98E9PRG8 122 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 SERPINI2O75830 405 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 IGHV1-46P01743 117 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 MT-ND1P03886 318 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 ASAH2BP0C7U1 165 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 ADORA3P0DMS8 318 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 AHCYP23526 432 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 RBM34P42696 430 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 SLC6A9P48067 706 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF81P51508 661 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 PSME3P61289 254 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 FAM189A2Q15884 450 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 TMEM255AQ5JRV8 349 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 C9orf139Q6ZV77 190 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF627Q7L945 461 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 VTCN1Q7Z7D3 282 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 PFN4Q8NHR9 129 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF519Q8TB69 540 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 C11orf40Q8WZ69 217 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 PRRC1Q96M27 445 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 TAS2R5Q9NYW4 299 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 RIMS3Q9UJD0 308 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 RNF114Q9Y508 228 aa11.56□□□□□ -0.56
SHKBP1-208ENST00000595726 SLC22A23A1A5C7 686 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 NDUFAB1O14561 156 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 NDUFA7O95182 113 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 PLATP00750 562 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 IGF2P01344 180 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 THRBP10828 461 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 UMPSP11172 480 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 PAX8Q06710 450 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 CAMK2DQ13557 499 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 BRD3OSQ6XYD6 125 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 CBLL1Q75N03 491 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 PIGWQ7Z7B1 504 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 SLC30A7Q8NEW0 376 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 TMEM239Q8WW34 195 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 GEMIN6Q8WXD5 167 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 LZICQ8WZA0 190 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 LRR1Q96L50 414 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 FOXB1Q99853 325 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 KCTD14Q9BQ13 255 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 TCF7L1Q9HCS4 588 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 SPAG4Q9NPE6 437 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 C20orf141Q9NUB4 165 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 A4GNTQ9UNA3 340 aa11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 POLR3KQ9Y2Y1 108 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-208ENST00000595726 DNAH3Q8TD57 4116 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 DYNC1I1O14576 645 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 GSTA4O15217 222 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 RNF13O43567 381 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 UBL3O95164 117 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 OR6A2O95222 327 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF682O95780 498 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 SERPINA1P01009 418 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 IGHV2-70P01814 119 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 IFNW1P05000 195 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 NCK1P16333 377 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms