RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 COL8A2P25067 703 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 SDHAP31040 664 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 GUCA1AP43080 201 aaPredicted RBP11.87□□□□□ -0.51
APOC1-208ENST00000592535 MAGEB1P43366 347 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 GDI2P50395 445 aaKnown RBP11.87□□□□□ -0.51
APOC1-208ENST00000592535 CHN2P52757 468 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 SELENOVP59797 346 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 MXRA7P84157 204 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 SPIBQ01892 262 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 GLO1Q04760 184 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 KRR1Q13601 381 aaKnown RBP11.87□□□□□ -0.51
APOC1-208ENST00000592535 FAM166AQ6J272 317 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 ZNF774Q6NX45 483 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 C16orf89Q6UX73 402 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 DEFB107AQ8IZN7 70 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 GTF3AQ92664 365 aaKnown RBP11.87□□□□□ -0.51
APOC1-208ENST00000592535 YIPF5Q969M3 257 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 SNX18Q96RF0 628 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 GPX7Q96SL4 187 aaPredicted RBP11.87□□□□□ -0.51
APOC1-208ENST00000592535 MDFIQ99750 246 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 CHODLQ9H9P2 273 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 KCNS2Q9ULS6 477 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 TIMM10BQ9Y5J6 103 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 IER3IP1Q9Y5U9 82 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 C12orf71A8MTZ7 269 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 C17orf100A8MU93 164 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 SOCS2O14508 198 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 AHCYL1O43865 530 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 GADD45GO95257 159 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 MPV17P39210 176 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 PCBD1P61457 104 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 TMEM255AQ5JRV8 349 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 SPATA46Q5T0L3 261 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 OTPQ5XKR4 325 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 GPR139Q6DWJ6 353 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 RFPL4BQ6ZWI9 263 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 ZER1Q7Z7L7 766 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 SNX33Q8WV41 574 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 RDH5Q92781 318 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 MCUR1Q96AQ8 359 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 SYT4Q9H2B2 425 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 RERGLQ9H628 205 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 KRCC1Q9NPI7 259 aaPredicted RBP11.86□□□□□ -0.51
APOC1-208ENST00000592535 HINT3Q9NQE9 182 aaKnown RBP11.86□□□□□ -0.51
APOC1-208ENST00000592535 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 SLCO1C1Q9NYB5 712 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 EIF3KQ9UBQ5 218 aaKnown RBP11.86□□□□□ -0.51
APOC1-208ENST00000592535 GPR160Q9UJ42 338 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
APOC1-208ENST00000592535 SLC16A7O60669 478 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 PPP1R3DO95685 299 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 TGFAP01135 160 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 NGFP01138 241 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 IGHV3-13P01766 116 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 FABP3P05413 133 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 ACHEP22303 614 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
APOC1-208ENST00000592535 SMIM11AP58511 58 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 CCL8P80075 99 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 ZNF718Q3SXZ3 478 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 TMEM154Q6P9G4 183 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 SMARCD3Q6STE5 483 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 DPY19L2P2Q6ZN68 376 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 IL17RELQ6ZVW7 336 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 PTCHD4Q6ZW05 846 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 SYT9Q86SS6 491 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 FITM2Q8N6M3 262 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 ABHD4Q8TB40 342 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 FANK1Q8TC84 345 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 IPCEF1Q8WWN9 437 aaPredicted RBP11.85□□□□□ -0.51
APOC1-208ENST00000592535 MARS2Q96GW9 593 aaKnown RBP11.85□□□□□ -0.51
APOC1-208ENST00000592535 BEX2Q9BXY8 128 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 OR2J1Q9GZK6 312 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
APOC1-208ENST00000592535 ZNF275Q9NSD4 429 aaPredicted RBP11.85□□□□□ -0.51
APOC1-208ENST00000592535 VSX1Q9NZR4 365 aaPredicted RBP11.85□□□□□ -0.51
APOC1-208ENST00000592535 COA3Q9Y2R0 106 aaPredicted RBP11.85□□□□□ -0.51
APOC1-208ENST00000592535 DOK2O60496 412 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 ICMTO60725 284 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 CDC14BO60729 498 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 KHDRBS3O75525 346 aaKnown RBP11.84□□□□□ -0.51
APOC1-208ENST00000592535 RP2O75695 350 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 MPZL1O95297 269 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 TXNDC12O95881 172 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 ATP6V1B2P21281 511 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 GCH1P30793 250 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 RRM2P31350 389 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 CDKN2AP42771 156 aaKnown RBP11.84□□□□□ -0.51
APOC1-208ENST00000592535 RPS6KA3P51812 740 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 PPP1CBP62140 327 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 SCRN3Q0VDG4 424 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 CCNIQ14094 377 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 SPATS1Q496A3 300 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 ADCK1Q86TW2 530 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 ZDHHC21Q8IVQ6 265 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 KLF14Q8TD94 323 aaPredicted RBP11.84□□□□□ -0.51
APOC1-208ENST00000592535 HPS1Q92902 700 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms