RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 OTULINQ96BN8 352 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 S100PBPQ96BU1 408 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 SLC25A44Q96H78 314 aaPredicted RBP5.62□□□□□ -1.51
VPS4B-205ENST00000591383 GPX7Q96SL4 187 aaPredicted RBP5.62□□□□□ -1.51
VPS4B-205ENST00000591383 CIB1Q99828 191 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 TSSK6Q9BXA6 273 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 GABARAPL1Q9H0R8 117 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 FN3KQ9H479 309 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 SMURF2Q9HAU4 748 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 CRLF2Q9HC73 371 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 GPR35Q9HC97 309 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 PLSCR4Q9NRQ2 329 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 TAS2R16Q9NYV7 291 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 JKAMPQ9P055 326 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 PLEKHB1Q9UF11 243 aaPredicted RBP5.62□□□□□ -1.51
VPS4B-205ENST00000591383 POFUT2Q9Y2G5 429 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 POLR1DQ9Y2S0 133 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 IER3IP1Q9Y5U9 82 aa5.62□□□□□ -1.51
VPS4B-205ENST00000591383 KLF2Q9Y5W3 355 aaPredicted RBP5.62□□□□□ -1.51
VPS4B-205ENST00000591383 SETXQ7Z333 2677 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 LOC102725191A0A1B0GVB3 256 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 A0A1W2PR80 420 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 WIPF3A6NGB9 483 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TUBAL3A6NHL2 446 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 NPIPB13A6NJU9 1138 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 NPIPB4C9JG80 1138 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 M0R129 80 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 RRP9O43818 475 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 MITFO75030 526 aaPredicted RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TRMUO75648 421 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF432O94892 652 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TACC2O95359 2948 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 WNT11O96014 354 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 RENP00797 406 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 IFNGP01579 166 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 QDPRP09417 244 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TSPAN19P0C672 248 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ANXA8P13928 327 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ANPEPP15144 967 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ACADSP16219 412 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF3P17036 446 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 PSMB1P20618 241 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 MPGP29372 298 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 KIR2DL3P43628 341 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 DAPP51397 102 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF84P51523 738 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 SH3BGRP55822 239 aaPredicted RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TUBA1BP68363 451 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TUBA4AP68366 448 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TGFBR3Q03167 851 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 P2RY6Q15077 328 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 LRRC36Q1X8D7 754 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 RFX4Q33E94 735 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 HIKESHIQ53FT3 197 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 PHYHD1Q5SRE7 291 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ARMC4Q5T2S8 1044 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 HIST2H2BCQ6DN03 193 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 FAHD1Q6P587 224 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF813Q6ZN06 617 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 DPY19L2P2Q6ZN68 376 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TUBA1AQ71U36 451 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 CBR4Q8N4T8 237 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF433Q8N7K0 673 aaPredicted RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ARIH2OSQ8N7S6 290 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 LRRC75AQ8NAA5 344 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 STEAP2Q8NFT2 490 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 OR4Q3Q8NH05 313 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 OR4K13Q8NH42 304 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 OR52N5Q8NH56 324 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 LINC01560Q8TB33 94 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 EME1Q96AY2 570 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 NMD3Q96D46 503 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 NRBF2Q96F24 287 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 PLEKHA8Q96JA3 519 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 FOXN4Q96NZ1 517 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 RBM4BQ9BQ04 359 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 C9orf16Q9BUW7 83 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ALG12Q9BV10 488 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 RBM4Q9BWF3 364 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 C1orf43Q9BWL3 253 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 LINC00470Q9BZP3 86 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 SYT4Q9H2B2 425 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 TMEM140Q9NV12 185 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ELOVL5Q9NYP7 299 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 GLTPQ9NZD2 209 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ENOPH1Q9UHY7 261 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 FBXO9Q9UK97 447 aaPredicted RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF346Q9UL40 294 aaKnown RBP5.61□□□□□ -1.51
VPS4B-205ENST00000591383 CELSR2Q9HCU4 2923 aa5.61□□□□□ -1.51
VPS4B-205ENST00000591383 ALPK2Q86TB3 2170 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 PRSS37A4D1T9 235 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 BHLHE40O14503 412 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 IMPA2O14732 288 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 DHHO43323 396 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 PTP4A3O75365 173 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 CNOT4O95628 575 aaKnown RBP5.6□□□□□ -1.51
VPS4B-205ENST00000591383 CD79AP11912 226 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 HIST1H1CP16403 213 aaKnown RBP5.6□□□□□ -1.51
VPS4B-205ENST00000591383 PAICSP22234 425 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms