RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SERPINA5P05154 406 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ERCC1P07992 297 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-208ENST00000589797 EPHA8P29322 1005 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-208ENST00000589797 LIMS1P48059 325 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ACTBP60709 375 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 RRAS2P62070 204 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ACTG1P63261 375 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ZNF85Q03923 595 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 SLC35D3Q5M8T2 416 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 B3GNTL1Q67FW5 361 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-208ENST00000589797 C3orf33Q6P1S2 294 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 RABEPKQ7Z6M1 372 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ZNF611Q8N823 705 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 CNEP1R1Q8N9A8 125 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ASB17Q8WXJ9 295 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ROBO4Q8WZ75 1007 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 CHST11Q9NPF2 352 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 SLC7A11Q9UPY5 501 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 A0A1B0GV50 99 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 CXCL13O43927 109 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 MT-ATP6P00846 226 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 HOXD12P35452 270 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 MYBPHQ13203 477 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 IDO2Q6ZQW0 420 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 SLC16A14Q7RTX9 510 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 OR51S1Q8NGJ8 323 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 TSPAN32Q96QS1 320 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 C1QTNF6Q9BXI9 259 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 TXNIPQ9H3M7 391 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 HRGP04196 525 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 CELA2AP08217 269 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 FCGR2AP12318 317 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 LAP3P28838 519 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 DEFA5Q01523 94 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 Q6ZTK2 550 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ZNF679Q8IYX0 411 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 LRRC20Q8TCA0 184 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 SLAMF6Q96DU3 332 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 BORCS8Q96FH0 119 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 RANBP3Q9H6Z4 567 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-208ENST00000589797 C12orf49Q9H741 205 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 ANAPC1Q9H1A4 1944 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 A0A096LPE4 126 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 A0A1W2PPZ6 126 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 MRPL33O75394 65 aaKnown RBP13.15□□□□□ -0.3
RETREG3-208ENST00000589797 UQCRC1P31930 480 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 CYB561P49447 251 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 GRK1Q15835 563 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 C9orf40Q8IXQ3 194 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 MAFIPQ8WZ33 124 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 VOPP1Q96AW1 172 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 PLA2G3Q9NZ20 509 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 FBXL2Q9UKC9 423 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 CAMK2AQ9UQM7 478 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 AKR7A2O43488 359 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 PATE4P0C8F1 98 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-208ENST00000589797 FUT7Q11130 342 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 IRF3Q14653 427 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 ZNF141Q15928 474 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 ZNF764Q96H86 408 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-208ENST00000589797 COPZ2Q9P299 210 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 MYOTQ9UBF9 498 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 PRH1P02810 166 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 MSL3P1P0C860 447 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 APOBEC1P41238 236 aaKnown RBP13.15□□□□□ -0.3
RETREG3-208ENST00000589797 MTCP1P56278 107 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 BAIAP2L2Q6UXY1 529 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 NPEPL1Q8NDH3 523 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 ALKBH3Q96Q83 286 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-208ENST00000589797 MIXL1Q9H2W2 232 aa13.15□□□□□ -0.3
RETREG3-208ENST00000589797 TNFRSF10AO00220 468 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 ADAM11O75078 769 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 RAB40ALP0C0E4 278 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 AKAIN1P0CW23 69 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 BDKRB2P30411 391 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 MFAP5Q13361 173 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 TNK1Q13470 666 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 RIN1Q13671 783 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 C2orf76Q3KRA6 126 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 TMEM91Q6ZNR0 172 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 MISPQ8IVT2 679 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 OR51A4Q8NGJ6 313 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 RAB40AQ8WXH6 277 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 SLC6A15Q9H2J7 730 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 B3GALT1Q9Y5Z6 326 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 PRUNE2Q8WUY3 3088 aa13.15□□□□□ -0.31
RETREG3-208ENST00000589797 CCDC163A0A0D9SF12 145 aa13.14□□□□□ -0.31
RETREG3-208ENST00000589797 RECKO95980 971 aa13.14□□□□□ -0.31
RETREG3-208ENST00000589797 PI3P19957 117 aa13.14□□□□□ -0.31
RETREG3-208ENST00000589797 CD34P28906 385 aa13.14□□□□□ -0.31
RETREG3-208ENST00000589797 FGF9P31371 208 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-208ENST00000589797 CCL11P51671 97 aa13.14□□□□□ -0.31
RETREG3-208ENST00000589797 SLC17A1Q14916 467 aa13.14□□□□□ -0.31
RETREG3-208ENST00000589797 SLC9A3R2Q15599 337 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms