RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 NUDT9Q9BW91 350 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 CCDC86Q9H6F5 360 aaKnown RBP12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 KLHDC2Q9Y2U9 406 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 WDFY3Q8IZQ1 3526 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 A0A1B0GX78 115 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 LEUTXA8MZ59 168 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 PSMD9O00233 223 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 PLPP3O14495 311 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 TOX3O15405 576 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 NPIPB7O75200 414 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 CTAG2O75638 210 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 AQP8O94778 261 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 CRYZL1O95825 349 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 ISG15P05161 165 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 CD37P11049 281 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 NAGAP17050 411 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 ADRA2CP18825 462 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 NFYAP23511 347 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 MSX1P28360 303 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 CSF2RBP32927 897 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 APOBEC1P41238 236 aaKnown RBP12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 DNASE1L1P49184 302 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 DHPSP49366 369 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 GFERP55789 205 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 GPR85P60893 370 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 FAM189A2Q15884 450 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 ACKR1Q16570 336 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 MEP1BQ16820 701 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 ARHGAP40Q5TG30 622 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 SERPINA12Q8IW75 414 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 ELMOD2Q8IZ81 293 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 ABCA7Q8IZY2 2146 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 SHISA5Q8N114 240 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 TMEM229BQ8NBD8 167 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 GPR119Q8TDV5 335 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 FAM3DQ96BQ1 224 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 SLC25A36Q96CQ1 311 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 DPYSL5Q9BPU6 564 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 GSX2Q9BZM3 304 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 MYOZ1Q9NP98 299 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 MED11Q9P086 117 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 KLK11Q9UBX7 282 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 PISDQ9UG56 409 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 NUP50Q9UKX7 468 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 HHLA2Q9UM44 414 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 SESN1Q9Y6P5 492 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 SMG1Q96Q15 3661 aaKnown RBP12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 THADAQ6YHU6 1953 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 LAMA1P25391 3075 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 EML5Q05BV3 1969 aa12.64□□□□□ -0.39
NEDD4L-223ENST00000588516 SLC22A23A1A5C7 686 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 METTL21EPA6NDL7 271 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 ANKUB1A6NFN9 424 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 OR6C65A6NJZ3 312 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 PRR32B1ATL7 298 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 AGRPO00253 132 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 FADS1O60427 444 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 SLC16A7O60669 478 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 HPXP02790 462 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 HRGP04196 525 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 SPARCP09486 303 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 UBCP0CG48 685 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 RAB6AP20340 208 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 MST1P26927 711 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 CCKBRP32239 447 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 POU3F4P49335 361 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 CLDN12P56749 244 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 NXPH1P58417 271 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 ADAM8P78325 824 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 PUDPQ08623 228 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 C17orf67Q0P5P2 114 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 CAMK2BQ13554 666 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 EIF2B1Q14232 305 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 OPCMLQ14982 345 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 ZMYND11Q15326 602 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 LINC00303Q3SY05 128 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 WDR38Q5JTN6 314 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 PMS2CLQ68D20 193 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 TMEM205Q6UW68 189 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 MARCH3Q86UD3 253 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 CATSPERDQ86XM0 798 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 PRSS35Q8N3Z0 413 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 ZNF441Q8N8Z8 693 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 BEST4Q8NFU0 473 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 OR11H4Q8NGC9 324 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 OR52N5Q8NH56 324 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 MFSD8Q8NHS3 518 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 TGIF2Q9GZN2 237 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 HEXA-AS1Q9H8Q6 139 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 SDHAF3Q9NRP4 125 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 MED9Q9NWA0 146 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 GLTPQ9NZD2 209 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 MRPL15Q9P015 296 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 TMEM184BQ9Y519 407 aaPredicted RBP12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 R4GMQ9 66 aa12.63□□□□□ -0.39
NEDD4L-223ENST00000588516 NAV2Q8IVL1 2488 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms