RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, human

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC130-208	ENST00000588071	SLC35F2	Q8IXU6	374 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	CCDC36	Q8IYA8	594 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	STX19	Q8N4C7	294 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	SMAP2	Q8WU79	429 aa	Predicted RBP	12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	NANOS1	Q8WY41	292 aa	Known RBP	12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	RNASE6	Q93091	150 aa	Known RBP	12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	MYDGF	Q969H8	173 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	YIPF3	Q9GZM5	350 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	MARCH7	Q9H992	704 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	MRPS18A	Q9NVS2	196 aa	Known RBP	12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	PSORS1C1	Q9UIG5	152 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	LAMP5	Q9UJQ1	280 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	EXOG	Q9Y2C4	368 aa	Known RBP	12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071	CACNA1C	Q13936	2221 aa		12.37	□□□□□ -0.43
CCDC130-208	ENST00000588071		A0A1W2PR80	420 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	ZNF670-ZNF695	F2Z2N8	137 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071		J3QKU1	62 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	UBL3	O95164	117 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	OR2T7	P0C7T2	308 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	PATE4	P0C8F1	98 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	CRHBP	P24387	322 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	EEF1B2	P24534	225 aa	Known RBP	12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	UGT2B10	P36537	528 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	RPS27	P42677	84 aa	Known RBP	12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	CHN2	P52757	468 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	ST3GAL4	Q11206	333 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	AQP6	Q13520	282 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	EIF2B1	Q14232	305 aa	Known RBP	12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	ENDOG	Q14249	297 aa	Known RBP	12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	CDSN	Q15517	529 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	FBXL19-AS1	Q494R0	122 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	TEX30	Q5JUR7	227 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	SLC18B1	Q6NT16	456 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	TMEM53	Q6P2H8	277 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	TMEM154	Q6P9G4	183 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	CORO6	Q6QEF8	472 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	AHSA2	Q719I0	299 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	DPPA2	Q7Z7J5	298 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	SYT9	Q86SS6	491 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	P2RY8	Q86VZ1	359 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	LINC00346	Q8IVM7	164 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	C17orf78	Q8N4C9	275 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	ZNF454	Q8N9F8	522 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	GJC3	Q8NFK1	279 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	OR52I1	Q8NGK6	324 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	OR2T27	Q8NH04	317 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	THEM6	Q8WUY1	208 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	IPCEF1	Q8WWN9	437 aa	Predicted RBP	12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	S100PBP	Q96BU1	408 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	MUCL1	Q96DR8	90 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	FBXO17	Q96EF6	278 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	TMEM80	Q96HE8	168 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	TBX5	Q99593	518 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	USB1	Q9BQ65	265 aa	Known RBP	12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	COPS4	Q9BT78	406 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	WAC	Q9BTA9	647 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	ACTR6	Q9GZN1	396 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	C1orf198	Q9H425	327 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	SLC17A5	Q9NRA2	495 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	CNOT2	Q9NZN8	540 aa	Known RBP	12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	ASH2L	Q9UBL3	628 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	CYB5R1	Q9UHQ9	305 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	MYRF	Q9Y2G1	1151 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	TIMM10B	Q9Y5J6	103 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	TMEM14A	Q9Y6G1	99 aa		12.36	□□□□□ -0.43
CCDC130-208	ENST00000588071	DAPL1	A0PJW8	107 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	RAB36	O95755	333 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	WNT11	O96014	354 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	HLA-H	P01893	362 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	PIP	P12273	146 aa	Predicted RBP	12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	ZNF32	P17041	273 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	DCK	P27707	260 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	ARR3	P36575	388 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	SLC15A1	P46059	708 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	TUBA1B	P68363	451 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	TUBA4A	P68366	448 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	SCRN3	Q0VDG4	424 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	TIMM23B	Q5SRD1	257 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	TUBA1A	Q71U36	451 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	DCXR	Q7Z4W1	244 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	CDC20B	Q86Y33	519 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	ACBD7	Q8N6N7	88 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	OR52N5	Q8NH56	324 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	OTOS	Q8NHW6	89 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	BOD1	Q96IK1	185 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	MNT	Q99583	582 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	FGF20	Q9NP95	211 aa	Predicted RBP	12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	OBP2B	Q9NPH6	170 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	CHCHD3	Q9NX63	227 aa	Known RBP	12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	GDF2	Q9UK05	429 aa	Predicted RBP	12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	AMDHD2	Q9Y303	409 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	LHFPL6	Q9Y693	200 aa		12.35	□□□□□ -0.43
CCDC130-208	ENST00000588071	HEATR1	Q9H583	2144 aa	Known RBP	12.34	□□□□□ -0.43
CCDC130-208	ENST00000588071	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.34	□□□□□ -0.43
CCDC130-208	ENST00000588071	OR5H1	A6NKK0	313 aa		12.34	□□□□□ -0.43
CCDC130-208	ENST00000588071	PHYH	O14832	338 aa		12.34	□□□□□ -0.43
CCDC130-208	ENST00000588071	RER1	O15258	196 aa		12.34	□□□□□ -0.43
CCDC130-208	ENST00000588071	LYN	P07948	512 aa		12.34	□□□□□ -0.43
CCDC130-208	ENST00000588071	MYL12A	P19105	171 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms