RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CPEB3Q8NE35 698 aaKnown RBP8.72□□□□□ -1.01
TPM4-207ENST00000588032 OR2T33Q8NG76 320 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 OR52E2Q8NGJ4 325 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 OR4K13Q8NH42 304 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 DNAJC9Q8WXX5 260 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 MRPL24Q96A35 216 aaKnown RBP8.72□□□□□ -1.01
TPM4-207ENST00000588032 NRBF2Q96F24 287 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 DUS3LQ96G46 650 aaKnown RBP8.72□□□□□ -1.01
TPM4-207ENST00000588032 C18orf12Q96KH6 178 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 POM121L2Q96KW2 1035 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 DOK1Q99704 481 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 ZNF416Q9BWM5 594 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 TSSK6Q9BXA6 273 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 RACGAP1Q9H0H5 632 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 RAB1BQ9H0U4 201 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 MS4A5Q9H3V2 200 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 RERGLQ9H628 205 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 ZNF556Q9HAH1 456 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 SRA1Q9HD15 236 aaKnown RBP8.72□□□□□ -1.01
TPM4-207ENST00000588032 DLL4Q9NR61 685 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 TBC1D23Q9NUY8 699 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 PDP1Q9P0J1 537 aaPredicted RBP8.72□□□□□ -1.01
TPM4-207ENST00000588032 GPR160Q9UJ42 338 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 KLHL21Q9UJP4 597 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 NDRG4Q9ULP0 352 aaKnown RBP8.72□□□□□ -1.01
TPM4-207ENST00000588032 B9D1Q9UPM9 204 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 FKBP7Q9Y680 259 aa8.72□□□□□ -1.01
TPM4-207ENST00000588032 HEATR1Q9H583 2144 aaKnown RBP8.72□□□□□ -1.01
TPM4-207ENST00000588032 IGLV1-36A0A0B4J1U3 117 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 TMEM129A0AVI4 362 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 ICMTO60725 284 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 CIB2O75838 187 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 CSF3P09919 207 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 TUBG1P23258 451 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 APEX1P27695 318 aaKnown RBP8.71□□□□□ -1.02
TPM4-207ENST00000588032 NUDT6P53370 316 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.71□□□□□ -1.02
TPM4-207ENST00000588032 MOGQ16653 247 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 CLEC12AQ5QGZ9 265 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 SLC35F1Q5T1Q4 408 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 RGS7BPQ6MZT1 257 aaPredicted RBP8.71□□□□□ -1.02
TPM4-207ENST00000588032 ASRGL1Q7L266 308 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 NPEPL1Q8NDH3 523 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 GJC3Q8NFK1 279 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 OR2T4Q8NH00 348 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 TEX47Q8TBZ9 253 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 IPCEF1Q8WWN9 437 aaPredicted RBP8.71□□□□□ -1.02
TPM4-207ENST00000588032 C11orf40Q8WZ69 217 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 SLCO4A1Q96BD0 722 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 DDOQ99489 341 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 VRK1Q99986 396 aaPredicted RBP8.71□□□□□ -1.02
TPM4-207ENST00000588032 WNT5BQ9H1J7 359 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 ELOVL3Q9HB03 270 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 MYOZ1Q9NP98 299 aaPredicted RBP8.71□□□□□ -1.02
TPM4-207ENST00000588032 RPRD1BQ9NQG5 326 aaKnown RBP8.71□□□□□ -1.02
TPM4-207ENST00000588032 TUBG2Q9NRH3 451 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 ARMC1Q9NVT9 282 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.02
TPM4-207ENST00000588032 MYO9AB2RTY4 2548 aa8.71□□□□□ -1.02
TPM4-207ENST00000588032 ROS1P08922 2347 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 CCDC168Q8NDH2 2452 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 LOC100509620A0A075B734 347 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 C5orf49A4QMS7 147 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 OR6C68A6NDL8 312 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 H3BN98 237 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 DCTN6O00399 190 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 SGCEO43556 437 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 SYNGR3O43761 229 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 SSX4O60224 188 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 GPRIN2O60269 458 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 NDUFS7O75251 213 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 IFNGP01579 166 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 SCG5P05408 212 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 LCKP06239 509 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 INHBBP09529 407 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 FCGR1AP12314 374 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 CCL2P13500 99 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 ZNF250P15622 560 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 CCNOP22674 350 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 CENPAP49450 140 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 BLVRAP53004 296 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 ZNF362Q5T0B9 420 aaPredicted RBP8.7□□□□□ -1.02
TPM4-207ENST00000588032 ZNF774Q6NX45 483 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 SHQ1Q6PI26 577 aaKnown RBP8.7□□□□□ -1.02
TPM4-207ENST00000588032 CLEC2AQ6UVW9 174 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 UGT2A3Q6UWM9 527 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 DNM1P46Q6ZS02 220 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 BIVMQ86UB2 503 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 C10orf67Q8IYJ2 551 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 SVOPLQ8N434 492 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 OR10H5Q8NGA6 315 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 OR8D4Q8NGM9 314 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 AKR7LQ8NHP1 331 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 NEU4Q8WWR8 484 aaPredicted RBP8.7□□□□□ -1.02
TPM4-207ENST00000588032 TSSK2Q96PF2 358 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 NIPSNAP1Q9BPW8 284 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 RHNO1Q9BSD3 238 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 CDADC1Q9BWV3 514 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 TEX12Q9BXU0 123 aa8.7□□□□□ -1.02
TPM4-207ENST00000588032 MRPL37Q9BZE1 423 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms