RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 ZNF250P15622 560 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 CTLA4P16410 223 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 ZNF23P17027 643 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 MSR1P21757 451 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 GIFP27352 417 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 CDKN2AP42771 156 aaKnown RBP17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 MAGEB1P43366 347 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 SELENOVP59797 346 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 KRR1Q13601 381 aaKnown RBP17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 PTCHD4Q6ZW05 846 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 ZNF101Q8IZC7 436 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 ZNF540Q8NDQ6 660 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 BCL2L14Q9BZR8 327 aa17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 EIF3KQ9UBQ5 218 aaKnown RBP17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 COA3Q9Y2R0 106 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC6A-203ENST00000587818 LOC100289279A0A1B0GTE1 492 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 NCR1O76036 304 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 PPP1R3DO95685 299 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GPANK1O95872 356 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 NGFP01138 241 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 FABP3P05413 133 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 RRM2P31350 389 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IL2RGP31785 369 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GZMKP49863 264 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 KLF3P57682 345 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SMIM11AP58511 58 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 RINLQ6ZS11 566 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ZDHHC21Q8IVQ6 265 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ALDH16A1Q8IZ83 802 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SLC25A40Q8TBP6 338 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 YIPF5Q969M3 257 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TSSK2Q96PF2 358 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SNX18Q96RF0 628 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 NDEL1Q9GZM8 345 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SYT4Q9H2B2 425 aa17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 HINT3Q9NQE9 182 aaKnown RBP17.14■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IGLV3-9A0A075B6K5 115 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 C12orf71A8MTZ7 269 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 OR10H3O60404 316 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 LMX1BO60663 402 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 KHDRBS3O75525 346 aaKnown RBP17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ATP6V1B2P21281 511 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SDHAP31040 664 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 MPV17P39210 176 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CENPAP49450 140 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 PCBD1P61457 104 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 RIN1Q13671 783 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TMEM255AQ5JRV8 349 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GPR139Q6DWJ6 353 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SMARCD3Q6STE5 483 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 DPY19L2P2Q6ZN68 376 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ERMAPQ96PL5 475 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 MDFIQ99750 246 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 NUAK2Q9H093 628 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CHODLQ9H9P2 273 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IL1RAPQ9NPH3 570 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 NDE1Q9NXR1 346 aa17.13■□□□□ 0.33
TRAPPC6A-203ENST00000587818 C17orf100A8MU93 164 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CDC14BO60729 498 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TGFAP01135 160 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 T-ENOLP0DO92 83 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CCL8P80075 99 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 PPP1R8Q12972 351 aaKnown RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TSTQ16762 297 aaKnown RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 RFX4Q33E94 735 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CHRFAM7AQ494W8 412 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TMEM154Q6P9G4 183 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CCDC197Q8NCU1 140 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ABHD4Q8TB40 342 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 RDH5Q92781 318 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 MARS2Q96GW9 593 aaKnown RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SAMD8Q96LT4 415 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GPX7Q96SL4 187 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 OR2J1Q9GZK6 312 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 NARFLQ9H6Q4 476 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SRA1Q9HD15 236 aaKnown RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 KRCC1Q9NPI7 259 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 VSX1Q9NZR4 365 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TMCC3Q9ULS5 477 aa17.12■□□□□ 0.33
TRAPPC6A-203ENST00000587818 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 AHCYL1O43865 530 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 FAM107AO95990 144 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GCH1P30793 250 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 RPS6KA3P51812 740 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 MNAT1P51948 309 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 MS4A2Q01362 244 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CCNIQ14094 377 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ZNF718Q3SXZ3 478 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IL17RELQ6ZVW7 336 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 RFPL4BQ6ZWI9 263 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SLC7A6Q92536 515 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 C4orf45Q96LM5 186 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 OR52D1Q9H346 318 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SLCO1C1Q9NYB5 712 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GPR160Q9UJ42 338 aa17.11■□□□□ 0.33
TRAPPC6A-203ENST00000587818 DCTN6O00399 190 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 WNT9BO14905 357 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TXNDC12O95881 172 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IGHV3-13P01766 116 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms