RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 PDE7BQ9NP56 450 aa16.74■□□□□ 0.27
DDX39A-206ENST00000587730 COMMD9Q9P000 198 aa16.74■□□□□ 0.27
DDX39A-206ENST00000587730 PIAS3Q9Y6X2 628 aa16.74■□□□□ 0.27
DDX39A-206ENST00000587730 TICRRQ7Z2Z1 1910 aa16.74■□□□□ 0.27
DDX39A-206ENST00000587730 METTL21EPA6NDL7 271 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 A8MVM7 634 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 B4DGG1 531 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 CHURC1-FNTBB4DL54 471 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 SIX6O95475 246 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 IGKV3-11P04433 115 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 HLA-GP17693 338 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ATF4P18848 351 aaPredicted RBP16.73■□□□□ 0.27
DDX39A-206ENST00000587730 DNASE1L1P49184 302 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 FNTBP49356 437 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 SORDQ00796 357 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 GUCA2AQ02747 115 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 TOMM34Q15785 309 aaPredicted RBP16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ACKR1Q16570 336 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 C1orf100Q5SVJ3 147 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ZNF546Q86UE3 836 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 BEST3Q8N1M1 668 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 OR52N5Q8NH56 324 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 OR1S1Q8NH92 325 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 DUSP19Q8WTR2 217 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ADIPOR1Q96A54 375 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 LMF1Q96S06 567 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ADOQ96SZ5 270 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 PNO1Q9NRX1 252 aaKnown RBP16.73■□□□□ 0.27
DDX39A-206ENST00000587730 LANCL2Q9NS86 450 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 R4GMQ9 66 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 A0A1B0GTI1 187 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 LOC390937A0A1W2PQ73 354 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 KANTRA0A1W2PQU2 76 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 TLCD2A6NGC4 264 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 TSPAN4O14817 238 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ICOSLGO75144 302 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 KDM4BO94953 1096 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 HPP00738 406 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 AMY2AP04746 511 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ADAM8P78325 824 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 ELOCQ15369 112 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 C2orf68Q2NKX9 166 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 TMEM244Q5VVB8 128 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 DCAF12L2Q5VW00 463 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 FAHD2BQ6P2I3 314 aaPredicted RBP16.73■□□□□ 0.27
DDX39A-206ENST00000587730 LRRC69Q6ZNQ3 347 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 STPG2Q8N412 459 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 KCNRGQ8N5I3 272 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 PXT1Q8NFP0 134 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
DDX39A-206ENST00000587730 FAHD2AQ96GK7 314 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 AMELYQ99218 206 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 TBL1XR1Q9BZK7 514 aa16.73■□□□□ 0.27
DDX39A-206ENST00000587730 A0A0C4DFX4 3053 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 EIF1AYO14602 144 aaKnown RBP16.72■□□□□ 0.27
DDX39A-206ENST00000587730 LDLRAD4O15165 306 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 SLC16A7O60669 478 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 NPIPB7O75200 414 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 NAGAP17050 411 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 TBPP20226 339 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 POU3F2P20265 443 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-206ENST00000587730 EIF1AXP47813 144 aaKnown RBP16.72■□□□□ 0.27
DDX39A-206ENST00000587730 SRSF5Q13243 272 aaKnown RBP16.72■□□□□ 0.27
DDX39A-206ENST00000587730 EIF2B1Q14232 305 aaKnown RBP16.72■□□□□ 0.27
DDX39A-206ENST00000587730 ODF4Q2M2E3 257 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 GLYATL3Q5SZD4 288 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 YOD1Q5VVQ6 348 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-206ENST00000587730 ZNF627Q7L945 461 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 TMEM17Q86X19 198 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 ZNF584Q8IVC4 421 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 SFTPA2Q8IWL1 248 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 STEAP2Q8NFT2 490 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 OR8S1Q8NH09 359 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 KLHDC7BQ96G42 594 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 NUDT16L1Q9BRJ7 211 aaKnown RBP16.72■□□□□ 0.27
DDX39A-206ENST00000587730 SCN2AQ99250 2005 aa16.72■□□□□ 0.27
DDX39A-206ENST00000587730 IGKV3D-11A0A0A0MRZ8 115 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 SLC22A23A1A5C7 686 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 OR6C76A6NM76 312 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 AHSA1O95433 338 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 HYAL1Q12794 435 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 GRINAQ7Z429 371 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 ZDHHC22Q8N966 263 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 ZNF248Q8NDW4 579 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 ST8SIA2Q92186 375 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 DAZLQ92904 295 aaKnown RBP16.71■□□□□ 0.27
DDX39A-206ENST00000587730 SLC25A44Q96H78 314 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-206ENST00000587730 ABHD6Q9BV23 337 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 PTDSS2Q9BVG9 487 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 OR8D2Q9GZM6 311 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 ZNF576Q9H609 170 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 SOHLH2Q9NX45 425 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 RAB22AQ9UL26 194 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 GTF2A1LQ9UNN4 478 aa16.71■□□□□ 0.27
DDX39A-206ENST00000587730 TMED7-TICAM2A0A0A6YYA0 188 aa16.7■□□□□ 0.26
DDX39A-206ENST00000587730 NPIPB13A6NJU9 1138 aa16.7■□□□□ 0.26
DDX39A-206ENST00000587730 NPIPB4C9JG80 1138 aa16.7■□□□□ 0.26
DDX39A-206ENST00000587730 C11orf98E9PRG8 122 aa16.7■□□□□ 0.26
DDX39A-206ENST00000587730 LINC01565O15544 149 aa16.7■□□□□ 0.26
DDX39A-206ENST00000587730 TSPAN2O60636 221 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms