RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 LAPTM4AQ15012 233 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 TAF11Q15544 211 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 VMACQ2NL98 169 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 SPRNQ5BIV9 151 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 RFPL4BQ6ZWI9 263 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 SPICQ8N5J4 248 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 FNDC8Q8TC99 324 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 TSPEARQ8WU66 669 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 TMEM255BQ8WV15 326 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 TMEM239Q8WW34 195 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 RBP7Q96R05 134 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 WNT5BQ9H1J7 359 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 ZMAT3Q9HA38 289 aaKnown RBP11.87□□□□□ -0.51
DNMT1-213ENST00000587604 ELOVL3Q9HB03 270 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 MSL2Q9HCI7 577 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 NPHS2Q9NP85 383 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 PLEK2Q9NYT0 353 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 RIMS3Q9UJD0 308 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 TIMM10BQ9Y5J6 103 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 TRAPPC2LH3BP13 241 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 OR5F1O95221 314 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 IGHMP01871 453 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 CST2P09228 141 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 LAP3P28838 519 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 GUCA1AP43080 201 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-213ENST00000587604 SLC6A9P48067 706 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 PCBD1P61457 104 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 TNFAIP6P98066 277 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-213ENST00000587604 PSG7Q13046 419 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 ZNF154Q13106 437 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 PIN1Q13526 163 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-213ENST00000587604 TMEM155Q4W5P6 130 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 ARMCX4Q5H9R4 360 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 MTX3Q5HYI7 312 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 ARL9Q6T311 187 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 ZER1Q7Z7L7 766 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 KLHL36Q8N4N3 616 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 STON2Q8WXE9 905 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 C4orf45Q96LM5 186 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 DCLRE1CQ96SD1 692 aaKnown RBP11.86□□□□□ -0.51
DNMT1-213ENST00000587604 ALG12Q9BV10 488 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 PATZ1Q9HBE1 687 aaKnown RBP11.86□□□□□ -0.51
DNMT1-213ENST00000587604 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 ZNF69Q9UC07 566 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 EGFL7Q9UHF1 273 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 BAG5Q9UL15 447 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 MED31Q9Y3C7 131 aa11.86□□□□□ -0.51
DNMT1-213ENST00000587604 DNAJC9-AS1A6NH13 148 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-213ENST00000587604 THRBP10828 461 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 ZNF12P17014 697 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 TNFRSF1AP19438 455 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 TUBG1P23258 451 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 ALG10Q5BKT4 473 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 KLF17Q5JT82 389 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-213ENST00000587604 AGBL2Q5U5Z8 902 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 ZNF774Q6NX45 483 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 SYT9Q86SS6 491 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 LRRC28Q86X40 367 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-213ENST00000587604 BCL6BQ8N143 479 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-213ENST00000587604 ZNF283Q8N7M2 679 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 SAMD8Q96LT4 415 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 DUX5Q96PT3 197 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 MRI1Q9BV20 369 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 C1QTNF5Q9BXJ0 243 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 TUBG2Q9NRH3 451 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 HIF3AQ9Y2N7 669 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 INSIG2Q9Y5U4 225 aa11.85□□□□□ -0.51
DNMT1-213ENST00000587604 HTR3EA5X5Y0 456 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 POM121CA8CG34 1229 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 TNFRSF1BP20333 461 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 TNFSF4P23510 183 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 RPL27P61353 136 aaKnown RBP11.84□□□□□ -0.51
DNMT1-213ENST00000587604 BTG1P62324 171 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 BAMBIQ13145 260 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 HNRNPA0Q13151 305 aaKnown RBP11.84□□□□□ -0.51
DNMT1-213ENST00000587604 TOP3AQ13472 1001 aaPredicted RBP11.84□□□□□ -0.51
DNMT1-213ENST00000587604 BEND6Q5SZJ8 279 aaPredicted RBP11.84□□□□□ -0.51
DNMT1-213ENST00000587604 NANOGP8Q6NSW7 305 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 CLDN22Q8N7P3 220 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 C1orf147Q96MC9 270 aaPredicted RBP11.84□□□□□ -0.51
DNMT1-213ENST00000587604 WACQ9BTA9 647 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 UNKLQ9H9P5 680 aaKnown RBP11.84□□□□□ -0.51
DNMT1-213ENST00000587604 MAN2C1Q9NTJ4 1040 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 TBCCD1Q9NVR7 557 aa11.84□□□□□ -0.51
DNMT1-213ENST00000587604 NDRG4Q9ULP0 352 aaKnown RBP11.84□□□□□ -0.51
DNMT1-213ENST00000587604 WNK1Q9H4A3 2382 aa11.83□□□□□ -0.52
DNMT1-213ENST00000587604 C12orf71A8MTZ7 269 aa11.83□□□□□ -0.52
DNMT1-213ENST00000587604 A8MXK9 166 aa11.83□□□□□ -0.52
DNMT1-213ENST00000587604 CLDN34H7C241 214 aa11.83□□□□□ -0.52
DNMT1-213ENST00000587604 SHOX2O60902 331 aaPredicted RBP11.83□□□□□ -0.52
DNMT1-213ENST00000587604 ABHD16AO95870 558 aa11.83□□□□□ -0.52
DNMT1-213ENST00000587604 RNASE1P07998 156 aaKnown RBP11.83□□□□□ -0.52
DNMT1-213ENST00000587604 COX5BP10606 129 aa11.83□□□□□ -0.52
DNMT1-213ENST00000587604 GSTM3P21266 225 aa11.83□□□□□ -0.52
DNMT1-213ENST00000587604 SEC61A1P61619 476 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms