RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 CHODLQ9H9P2 273 aa13.76□□□□□ -0.21
CXXC1-209ENST00000587342 TMEM160Q9NX00 188 aa13.76□□□□□ -0.21
CXXC1-209ENST00000587342 GRHPRQ9UBQ7 328 aa13.76□□□□□ -0.21
CXXC1-209ENST00000587342 FAM32AQ9Y421 112 aaKnown RBP13.76□□□□□ -0.21
CXXC1-209ENST00000587342 LOC100289279A0A1B0GTE1 492 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 UNC119BA6NIH7 251 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 SOCS2O14508 198 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 NDUFB2O95178 105 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 NGFP01138 241 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 PTHP01270 115 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
CXXC1-209ENST00000587342 NKPD1Q17RQ9 610 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 CHRFAM7AQ494W8 412 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 FITM2Q8N6M3 262 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 OR1J1Q8NGS3 322 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 FNDC8Q8TC99 324 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 IPCEF1Q8WWN9 437 aaPredicted RBP13.75□□□□□ -0.21
CXXC1-209ENST00000587342 MARS2Q96GW9 593 aaKnown RBP13.75□□□□□ -0.21
CXXC1-209ENST00000587342 BCL2L14Q9BZR8 327 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 KCNN2Q9H2S1 579 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 POFUT1Q9H488 388 aa13.75□□□□□ -0.21
CXXC1-209ENST00000587342 C17orf100A8MU93 164 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 DCTN6O00399 190 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 LMX1BO60663 402 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 ICMTO60725 284 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 DCTN3O75935 186 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 MPZL1O95297 269 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 PPP1R3DO95685 299 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 GPANK1O95872 356 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 SDHAP31040 664 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 RAD52P43351 418 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 GDI2P50395 445 aaKnown RBP13.74□□□□□ -0.21
CXXC1-209ENST00000587342 SPIBQ01892 262 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 CCNIQ14094 377 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 RRM2BQ7LG56 351 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 ZNF540Q8NDQ6 660 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 SLC25A40Q8TBP6 338 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 C11orf40Q8WZ69 217 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 NSMCE2Q96MF7 247 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 RACGAP1Q9H0H5 632 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 LRMDAQ9H2I8 198 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 HINT3Q9NQE9 182 aaKnown RBP13.74□□□□□ -0.21
CXXC1-209ENST00000587342 ZNF275Q9NSD4 429 aaPredicted RBP13.74□□□□□ -0.21
CXXC1-209ENST00000587342 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
CXXC1-209ENST00000587342 TIMM10BQ9Y5J6 103 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 IER3IP1Q9Y5U9 82 aa13.74□□□□□ -0.21
CXXC1-209ENST00000587342 ZSCAN5BA6NJL1 495 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 XKRYO14609 159 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 GADD45GO95257 159 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 TXNDC12O95881 172 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 IGHV3-13P01766 116 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 CDKN2AP42771 156 aaKnown RBP13.73□□□□□ -0.21
CXXC1-209ENST00000587342 CHN2P52757 468 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 CCL8P80075 99 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 GPR139Q6DWJ6 353 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 ABHD4Q8TB40 342 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 FANK1Q8TC84 345 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 SLC7A6Q92536 515 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 RDH5Q92781 318 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 TSSK2Q96PF2 358 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 CCT8L2Q96SF2 557 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 OR2J1Q9GZK6 312 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 NARFLQ9H6Q4 476 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 CDC42EP3Q9UKI2 254 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 COA3Q9Y2R0 106 aaPredicted RBP13.73□□□□□ -0.21
CXXC1-209ENST00000587342 CACNG2Q9Y698 323 aa13.73□□□□□ -0.21
CXXC1-209ENST00000587342 C12orf71A8MTZ7 269 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 AHCYL1O43865 530 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 SLC16A7O60669 478 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 GMNNO75496 209 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 TGFAP01135 160 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 FABP3P05413 133 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 FAM157CP0CG43 387 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 GAAP10253 952 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 ACHEP22303 614 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 FPR3P25089 353 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 RRM2P31350 389 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 RBMXP38159 391 aaKnown RBP13.72□□□□□ -0.21
CXXC1-209ENST00000587342 MMP15P51511 669 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 PCBD1P61457 104 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 MRPS11P82912 194 aaKnown RBP13.72□□□□□ -0.21
CXXC1-209ENST00000587342 KRT72Q14CN4 511 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 SPRNQ5BIV9 151 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 FAM120AOSQ5T036 256 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 SMARCD3Q6STE5 483 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 C16orf89Q6UX73 402 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 CYP2R1Q6VVX0 501 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 DPY19L2P2Q6ZN68 376 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 VASH1Q7L8A9 365 aaPredicted RBP13.72□□□□□ -0.21
CXXC1-209ENST00000587342 ADCK1Q86TW2 530 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 CLDND2Q8NHS1 167 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 KLF14Q8TD94 323 aaPredicted RBP13.72□□□□□ -0.21
CXXC1-209ENST00000587342 HPS1Q92902 700 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 C1orf159Q96HA4 380 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 NUAK2Q9H093 628 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 RERGLQ9H628 205 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 IL1RAPQ9NPH3 570 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 SLCO1C1Q9NYB5 712 aa13.72□□□□□ -0.21
CXXC1-209ENST00000587342 KCNS2Q9ULS6 477 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms