RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 TAF11Q15544 211 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 UNQ6126/PRO20091Q6UXV3 157 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 OR51A7Q8NH64 312 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 TAF15Q92804 592 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 ATP6V1G3Q96LB4 118 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 CYSLTR2Q9NS75 346 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 INTS9Q9NV88 658 aaKnown RBP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 BAG5Q9UL15 447 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 ZDHHC8Q9ULC8 765 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 A0A0G2JND7 137 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 FOXH1O75593 365 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 VIMP08670 466 aaKnown RBP16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 TSPAN19P0C672 248 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 IFI30P13284 250 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 ARHGDIAP52565 204 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 OTPQ5XKR4 325 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 RBMS3Q6XE24 437 aaKnown RBP16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 CALHM3Q86XJ0 350 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 OR2Z1Q8NG97 314 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 TSPEARQ8WU66 669 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 LIPHQ8WWY8 451 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 TPD52L3Q96J77 140 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 SMURF2Q9HAU4 748 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 NTN4Q9HB63 628 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 STX18Q9P2W9 335 aaKnown RBP16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 RHCGQ9UBD6 479 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 ZNF69Q9UC07 566 aa16.98■□□□□ 0.31
CLPTM1-204ENST00000585961 FSHBP01225 129 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 CST2P09228 141 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 LIPAP38571 399 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 SEC61A1P61619 476 aaKnown RBP16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 CDK5R2Q13319 367 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 ENDOGQ14249 297 aaKnown RBP16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 MTX3Q5HYI7 312 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 C10orf82Q8WW14 230 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 LRRC58Q96CX6 371 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 BPIFA2Q96DR5 249 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 ELOVL3Q9HB03 270 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 EMC7Q9NPA0 242 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 TMEM106BQ9NUM4 274 aa16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 SOX21Q9Y651 276 aaPredicted RBP16.97■□□□□ 0.31
CLPTM1-204ENST00000585961 TRAV27A0A087WT01 109 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 H7C1C5 153 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 IGHV2-70P01814 119 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 PCBD1P61457 104 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 LCN6P62502 163 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 CYBRD1Q53TN4 286 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 KLF17Q5JT82 389 aaPredicted RBP16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 JAZF1Q86VZ6 243 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 DEFB108BQ8NET1 73 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 CMBLQ96DG6 245 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 ZNF583Q96ND8 569 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 ALG12Q9BV10 488 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 ZNF747Q9BV97 191 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 PURGQ9UJV8 347 aaKnown RBP16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 NUP50Q9UKX7 468 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 STARD10Q9Y365 291 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 AUP1Q9Y679 476 aa16.96■□□□□ 0.31
CLPTM1-204ENST00000585961 IGHV3OR16-10A0A075B7F0 116 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 TMPRSS2O15393 492 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 ABHD16AO95870 558 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 ADH4P08319 380 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 HKR1P10072 659 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 ZNF154Q13106 437 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 LRRC23Q53EV4 343 aaPredicted RBP16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 ARMCX4Q5H9R4 360 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 C1orf94Q6P1W5 598 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 Q6ZR03 302 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 LRRC28Q86X40 367 aaPredicted RBP16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 LRRC75AQ8NAA5 344 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 MAGEB18Q96M61 343 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 DIRC2Q96SL1 478 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 SH3GL1Q99961 368 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 PATZ1Q9HBE1 687 aaKnown RBP16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 HIF3AQ9Y2N7 669 aa16.95■□□□□ 0.3
CLPTM1-204ENST00000585961 MGAM2Q2M2H8 2515 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 LOC100653049A0A140TA62 436 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 C12orf71A8MTZ7 269 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 KRT34O76011 436 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 ZNF205O95201 554 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 IGF2P01344 180 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 IFNA14P01570 189 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 CD55P08174 381 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 KDELR2P33947 212 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 SLC6A9P48067 706 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 ST3GAL3Q11203 375 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 FOXL1Q12952 345 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 BAMBIQ13145 260 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 ARL9Q6T311 187 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 KLHL36Q8N4N3 616 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 ITLN1Q8WWA0 313 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 SLC7A6Q92536 515 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 SAMD8Q96LT4 415 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 ZNF48Q96MX3 618 aaPredicted RBP16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 POLR2J2Q9GZM3 115 aaKnown RBP16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 POLR2J3Q9H1A7 115 aaKnown RBP16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 A4GNTQ9UNA3 340 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 SNX13Q9Y5W8 968 aa16.94■□□□□ 0.3
CLPTM1-204ENST00000585961 MEGF8Q7Z7M0 2845 aa16.93■□□□□ 0.3
CLPTM1-204ENST00000585961 NPIPB13A6NJU9 1138 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms