RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SPATA46Q5T0L3 261 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 FAM166AQ6J272 317 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 ZNF774Q6NX45 483 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 C16orf89Q6UX73 402 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 ALDH16A1Q8IZ83 802 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 NSMCE2Q96MF7 247 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 NRIP3Q9NQ35 241 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 HINT3Q9NQE9 182 aaKnown RBP18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 CDC42EP3Q9UKI2 254 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 AURKCQ9UQB9 309 aa18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 YLPM1P49750 1951 aaKnown RBP18.35■□□□□ 0.53
PPP4R1-228ENST00000584074 C12orf71A8MTZ7 269 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 IMPA2O14732 288 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 AHCYL1O43865 530 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 GADD45GO95257 159 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 CTLA4P16410 223 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 SDHAP31040 664 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 MAGEB1P43366 347 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 CHN2P52757 468 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 SPIBQ01892 262 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 GLO1Q04760 184 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 OTPQ5XKR4 325 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 GPR139Q6DWJ6 353 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 ZER1Q7Z7L7 766 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 GTF3AQ92664 365 aaKnown RBP18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 RDH5Q92781 318 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 YIPF5Q969M3 257 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 GPX7Q96SL4 187 aaPredicted RBP18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 BEX2Q9BXY8 128 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 RERGLQ9H628 205 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 CHODLQ9H9P2 273 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 KRCC1Q9NPI7 259 aaPredicted RBP18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 TMEM160Q9NX00 188 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 SLCO1C1Q9NYB5 712 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 EIF3KQ9UBQ5 218 aaKnown RBP18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 GPR160Q9UJ42 338 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 IER3IP1Q9Y5U9 82 aa18.34■□□□□ 0.53
PPP4R1-228ENST00000584074 C17orf100A8MU93 164 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 SOCS2O14508 198 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 IGHV3-13P01766 116 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 SMIM11AP58511 58 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 TMEM154Q6P9G4 183 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 RFPL4BQ6ZWI9 263 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 SYT9Q86SS6 491 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 FITM2Q8N6M3 262 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 SNX33Q8WV41 574 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 MCUR1Q96AQ8 359 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 CCT8L2Q96SF2 557 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 SYT4Q9H2B2 425 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 NDE1Q9NXR1 346 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 KCNS2Q9ULS6 477 aa18.33■□□□□ 0.52
PPP4R1-228ENST00000584074 SLC16A7O60669 478 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 TGFAP01135 160 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 FABP3P05413 133 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 ACHEP22303 614 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 IGFBP5P24593 272 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 MPV17P39210 176 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 CCL8P80075 99 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 TMEM255AQ5JRV8 349 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 SMARCD3Q6STE5 483 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 DPY19L2P2Q6ZN68 376 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 PTCHD4Q6ZW05 846 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 ABHD4Q8TB40 342 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 SLC25A40Q8TBP6 338 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 MARS2Q96GW9 593 aaKnown RBP18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 IL1RAPQ9NPH3 570 aa18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 VSX1Q9NZR4 365 aaPredicted RBP18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 COA3Q9Y2R0 106 aaPredicted RBP18.32■□□□□ 0.52
PPP4R1-228ENST00000584074 ATRQ13535 2644 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 MPZL1O95297 269 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 NGFP01138 241 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 FAM157CP0CG43 387 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 CDKN2AP42771 156 aaKnown RBP18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 CCNIQ14094 377 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 ZNF718Q3SXZ3 478 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 SPATS1Q496A3 300 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 ADCK1Q86TW2 530 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 IPCEF1Q8WWN9 437 aaPredicted RBP18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 HPS1Q92902 700 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 OR2J1Q9GZK6 312 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 NUAK2Q9H093 628 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 SHARPINQ9H0F6 387 aa18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 ZNF275Q9NSD4 429 aaPredicted RBP18.31■□□□□ 0.52
PPP4R1-228ENST00000584074 MXRA5Q9NR99 2828 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 B2RBV5 119 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 OR10H3O60404 316 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 CDC14BO60729 498 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 KHDRBS3O75525 346 aaKnown RBP18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 RP2O75695 350 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 PPP1R3DO95685 299 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 TXNDC12O95881 172 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 IFNA2P01563 188 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 GCH1P30793 250 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 RRM2P31350 389 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 GPR6P46095 362 aaPredicted RBP18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 RPS6KA3P51812 740 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 MNAT1P51948 309 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 PPP1CBP62140 327 aa18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 MRPS11P82912 194 aaKnown RBP18.3■□□□□ 0.52
PPP4R1-228ENST00000584074 MOGQ16653 247 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms