RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TMEM54Q969K7 222 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 RASD2Q96D21 266 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 ZNF570Q96NI8 536 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 DOK1Q99704 481 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 IFT27Q9BW83 186 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 DGCR6LQ9BY27 220 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 RAB1BQ9H0U4 201 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 NRIP3Q9NQ35 241 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 GLTPQ9NZD2 209 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 TEX13CA0A0J9YWL9 993 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 NPIPB13A6NJU9 1138 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 NPIPB4C9JG80 1138 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 RPL36A-HNRNPH2H7BZ11 118 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 H7C1C5 153 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 IGHMP01871 453 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 HLA-HP01893 362 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 QDPRP09417 244 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 TACSTD2P09758 323 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 CBR1P16152 277 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 NPR2P20594 1047 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 GSTM3P21266 225 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 GIFP27352 417 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 SLC6A6P31641 620 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 LCN6P62502 163 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 CD47Q08722 323 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 LRFN4Q6PJG9 635 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 DPY19L2P2Q6ZN68 376 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 RASSF6Q6ZTQ3 369 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 HDDC2Q7Z4H3 204 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 C10orf67Q8IYJ2 551 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 ATG16L2Q8NAA4 619 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 NOXO1Q8NFA2 376 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 ZNF519Q8TB69 540 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
SKA2-209ENST00000583976 PKP2Q99959 881 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 MRPL13Q9BYD1 178 aaKnown RBP13.47□□□□□ -0.25
SKA2-209ENST00000583976 PLA2G12AQ9BZM1 189 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 ZNF556Q9HAH1 456 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 POFUT2Q9Y2G5 429 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 CDH10Q9Y6N8 788 aa13.47□□□□□ -0.25
SKA2-209ENST00000583976 ARRDC5A6NEK1 342 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 A6NIZ1 184 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 G3V2T6 193 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 SOCS2O14508 198 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 XKRYO14609 159 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 SLC2A10O95528 541 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 ADRA2AP08913 450 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 SDHAP31040 664 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 CHN2P52757 468 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 RAP1BP61224 184 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 RAP1AP62834 184 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 FMODQ06828 376 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 MESTQ5EB52 335 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 ZFP1Q6P2D0 407 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 FAM122BQ7Z309 247 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 FAM169BQ8N8A8 192 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 ICA1LQ8NDH6 482 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 OR52L1Q8NGH7 329 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 MCHR2Q969V1 340 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 GPX7Q96SL4 187 aaPredicted RBP13.46□□□□□ -0.25
SKA2-209ENST00000583976 MRPL37Q9BZE1 423 aaKnown RBP13.46□□□□□ -0.25
SKA2-209ENST00000583976 NARFLQ9H6Q4 476 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 S100A14Q9HCY8 104 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 TBC1D23Q9NUY8 699 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 KIF17Q9P2E2 1029 aa13.46□□□□□ -0.25
SKA2-209ENST00000583976 STX18Q9P2W9 335 aaKnown RBP13.46□□□□□ -0.25
SKA2-209ENST00000583976 TENM1Q9UKZ4 2725 aa13.46□□□□□ -0.26
SKA2-209ENST00000583976 SAC3D1A6NKF1 404 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 ZNF99A8MXY4 864 aaPredicted RBP13.45□□□□□ -0.26
SKA2-209ENST00000583976 H3BN98 237 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 IMPA2O14732 288 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 DHHO43323 396 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 ANXA8P13928 327 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 B4GALT1P15291 398 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 NOS3P29474 1203 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 DAPP51397 102 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 CDH15P55291 814 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 KRR1Q13601 381 aaKnown RBP13.45□□□□□ -0.26
SKA2-209ENST00000583976 RIN1Q13671 783 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 DAG1Q14118 895 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 MAD2L1BPQ15013 274 aaPredicted RBP13.45□□□□□ -0.26
SKA2-209ENST00000583976 HIST3H3Q16695 136 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 SLC35F1Q5T1Q4 408 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 ZDHHC13Q8IUH4 622 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 ZNF786Q8N393 782 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.45□□□□□ -0.26
SKA2-209ENST00000583976 OR8D4Q8NGM9 314 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 NEU4Q8WWR8 484 aaPredicted RBP13.45□□□□□ -0.26
SKA2-209ENST00000583976 NSMAFQ92636 917 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 STMN2Q93045 179 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 NRBF2Q96F24 287 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
SKA2-209ENST00000583976 RBP7Q96R05 134 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 SYT3Q9BQG1 590 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 TSSK6Q9BXA6 273 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 IL20Q9NYY1 176 aa13.45□□□□□ -0.26
SKA2-209ENST00000583976 FZR1Q9UM11 496 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms