RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	HMG20A	Q9NP66	347 aa		2.59	□□□□□ -1.99
NUP85-222	ENST00000583569	NMRK1	Q9NWW6	199 aa		2.59	□□□□□ -1.99
NUP85-222	ENST00000583569	CTSF	Q9UBX1	484 aa		2.59	□□□□□ -1.99
NUP85-222	ENST00000583569	MAPK8IP3	Q9UPT6	1336 aa		2.59	□□□□□ -2
NUP85-222	ENST00000583569	TET2	Q6N021	2002 aa	Predicted RBP	2.59	□□□□□ -2
NUP85-222	ENST00000583569	SLIT3	O75094	1523 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	TMEM150B	A6NC51	233 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	CCDC169	A6NNP5	214 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569		C9JVG2	144 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	VAMP5	O95183	116 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ACSM4	P0C7M7	580 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	CISD3	P0C7P0	127 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	IGHV1-8	P0DP01	117 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	KRTAP5-9	P26371	169 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	GDI1	P31150	447 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	RRM2	P31350	389 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	CEACAM3	P40198	252 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ZNF138	P52744	262 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	LRRC74A	Q0VAA2	488 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	C5orf47	Q569G3	176 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	PRAMEF20	Q5VT98	475 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	C9orf135	Q5VTT2	229 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	FBXW9	Q5XUX1	488 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	PLET1	Q6UQ28	207 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ACMSD	Q8TDX5	336 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	RNF139	Q8WU17	664 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ELMO1	Q92556	727 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	RACGAP1	Q9H0H5	632 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	SYNDIG1	Q9H7V2	258 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	C12orf10	Q9HB07	376 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ZNRD1	Q9P1U0	126 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ZNF282	Q9UDV7	671 aa	Predicted RBP	2.58	□□□□□ -2
NUP85-222	ENST00000583569	PITPNC1	Q9UKF7	332 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	RABL2B	Q9UNT1	228 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	IGSF9B	Q9UPX0	1349 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ANKRD11	Q6UB99	2663 aa	Predicted RBP	2.58	□□□□□ -2
NUP85-222	ENST00000583569	ZFHX4	Q86UP3	3567 aa		2.58	□□□□□ -2
NUP85-222	ENST00000583569	ANKRD17	O75179	2603 aa	Known RBP	2.57	□□□□□ -2
NUP85-222	ENST00000583569	MED1	Q15648	1581 aa	Predicted RBP	2.57	□□□□□ -2
NUP85-222	ENST00000583569	TNRC18	O15417	2968 aa	Predicted RBP	2.57	□□□□□ -2
NUP85-222	ENST00000583569	BET1	O15155	118 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	KLHL41	O60662	606 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	RP2	O75695	350 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	OR5H8	P0DN80	308 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	WARS	P23381	471 aa	Known RBP	2.57	□□□□□ -2
NUP85-222	ENST00000583569	CSNK1E	P49674	416 aa	Known RBP	2.57	□□□□□ -2
NUP85-222	ENST00000583569	PRMT2	P55345	433 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	KRTAP10-8	P60410	259 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	ESRRG	P62508	458 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	SYCN	Q0VAF6	134 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	MRPL23	Q16540	153 aa	Known RBP	2.57	□□□□□ -2
NUP85-222	ENST00000583569	ABCA11P	Q4W5N1	156 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	SOHLH1	Q5JUK2	328 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	METTL21C	Q5VZV1	264 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	CEMP1	Q6PRD7	247 aa	Predicted RBP	2.57	□□□□□ -2
NUP85-222	ENST00000583569	CERS6	Q6ZMG9	384 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	SLC16A14	Q7RTX9	510 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	RIMKLA	Q8IXN7	391 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	PRELID2	Q8N945	189 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	OR2A1	Q8NGT9	310 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	SLC38A4	Q969I6	547 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	ZNF681	Q96N22	645 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	ZNF355P	Q9NSJ1	428 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	HRASLS2	Q9NWW9	162 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	LGALS13	Q9UHV8	139 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	TMEM14A	Q9Y6G1	99 aa		2.57	□□□□□ -2
NUP85-222	ENST00000583569	IGLV1-50	A0A075B6I6	118 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	ZNF705G	A8MUZ8	300 aa	Predicted RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	AP3B1	O00203	1094 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	NUPL2	O15504	423 aa	Known RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	FTH1	P02794	183 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	ADRA2A	P08913	450 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	UBTFL6	P0CB48	400 aa	Predicted RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	EIF2S2	P20042	333 aa	Known RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	NPY1R	P25929	384 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	DCK	P27707	260 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	GPX4	P36969	197 aa	Predicted RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	PMEL	P40967	661 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	SLC1A1	P43005	524 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	RND2	P52198	227 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	VSX2	P58304	361 aa	Predicted RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	SRSF5	Q13243	272 aa	Known RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	PON2	Q15165	354 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	OR7A5	Q15622	319 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	FAM78A	Q5JUQ0	283 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	CARD17	Q5XLA6	110 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	REEP3	Q6NUK4	255 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	FBXW12	Q6X9E4	464 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	TMEM150A	Q86TG1	271 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	UBALD2	Q8IYN6	164 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	IQCK	Q8N0W5	287 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	OR4A4P	Q8NGN8	299 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	NTAN1	Q96AB6	310 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	DUS3L	Q96G46	650 aa	Known RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	DNAJC1	Q96KC8	554 aa	Known RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	ZNF382	Q96SR6	550 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	SPIN2A	Q99865	258 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	MICU1	Q9BPX6	476 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	SPIN2B	Q9BPZ2	258 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms