RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 RGNQ15493 299 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 TSTQ16762 297 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 PDCD4Q53EL6 469 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 ALG10BQ5I7T1 473 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 PAGE3Q5JUK9 113 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 SPATA46Q5T0L3 261 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 SHQ1Q6PI26 577 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 UEVLDQ8IX04 471 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 SLC22A24Q8N4F4 322 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 IPCEF1Q8WWN9 437 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 GEMIN6Q8WXD5 167 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 NABP1Q96AH0 204 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 NMD3Q96D46 503 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 ZMYND19Q96E35 227 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 ZNF347Q96SE7 839 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 RBM4Q9BWF3 364 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 ULBP2Q9BZM5 246 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 ZNF385DQ9H6B1 395 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 UNKLQ9H9P5 680 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 ZMAT3Q9HA38 289 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 HINT3Q9NQE9 182 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 SDR39U1Q9NRG7 319 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 MRPL39Q9NYK5 338 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 VAPAQ9P0L0 249 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 UGT2A1Q9Y4X1 527 aa6.62□□□□□ -1.35
PPP4R1-225ENST00000583438 RYR3Q15413 4870 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 IGHV3OR16-10A0A075B7F0 116 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 A0A0G2JPF8 293 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 HNRNPCL2B2RXH8 293 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 HNRNPCL3B7ZW38 293 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 TM9SF1O15321 606 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 BIRC5O15392 142 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 HNRNPCL1O60812 293 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 MFN2O95140 757 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 KRT75O95678 551 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 HNRNPCL4P0DMR1 293 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 IGHV4-38-2P0DP08 117 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 KITP10721 976 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 THRBP10828 461 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 MDKP21741 143 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 OMGP23515 440 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 AQP1P29972 269 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 CDAP32320 146 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 ERFP50548 548 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 COPZ1P61923 177 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 PAX2Q02962 417 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 FMODQ06828 376 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 SELPLGQ14242 412 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 LARS2Q15031 903 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 OR1Q1Q15612 314 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 HIST3H3Q16695 136 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 TRMT5Q32P41 509 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 ACSM5Q6NUN0 579 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 DHRS4L2Q6PKH6 230 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 Q6ZR03 302 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 RHOUQ7L0Q8 258 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 PTOV1Q86YD1 416 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 FITM2Q8N6M3 262 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 CLDN22Q8N7P3 220 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 SLC30A7Q8NEW0 376 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 VPS37AQ8NEZ2 397 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 OR4K5Q8NGD3 323 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 TBC1D15Q8TC07 691 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 LRR1Q96L50 414 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 SIGLEC11Q96RL6 698 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 TMEM109Q9BVC6 243 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 C12orf10Q9HB07 376 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 PDP1Q9P0J1 537 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 SLC7A8Q9UHI5 535 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 V9GYY5 206 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 NBEAL2Q6ZNJ1 2754 aa6.61□□□□□ -1.35
PPP4R1-225ENST00000583438 A0A0G2JMP0 313 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 A0A0X1KG70 313 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 CLIC1O00299 241 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 SLC22A3O75751 556 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 SLC2A10O95528 541 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 SNAP29O95721 258 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 RAB36O95755 333 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 NGFP01138 241 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 IGHV2-70P01814 119 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 OPN1SWP03999 348 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 ERCC1P07992 297 aaPredicted RBP6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 UQCRBP14927 111 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 NQO1P15559 274 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 RHCEP18577 417 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 FUT1P19526 365 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 PRKAR1BP31321 381 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 CSNK1A1P48729 337 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 STX3Q13277 289 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 GNA13Q14344 377 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 CNN3Q15417 329 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 ZNF74Q16587 644 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 DUSP7Q16829 419 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 MIDNQ504T8 468 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 LRIF1Q5T3J3 769 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 GKAP1Q5VSY0 366 aaPredicted RBP6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 DCAF12L2Q5VW00 463 aa6.6□□□□□ -1.35
PPP4R1-225ENST00000583438 OTPQ5XKR4 325 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms