RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MOGAT1Q96PD6 335 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 MMP27Q9H306 513 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 EVA1AQ9H8M9 152 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 BEX1Q9HBH7 125 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 TMEM27Q9HBJ8 222 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 CD300AQ9UGN4 299 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 SLC13A4Q9UKG4 626 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 PRPF19Q9UMS4 504 aaKnown RBP10.39□□□□□ -0.75
TOP3A-215ENST00000583328 INSIG2Q9Y5U4 225 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 NPTNQ9Y639 398 aa10.39□□□□□ -0.75
TOP3A-215ENST00000583328 LRRN3E7EW58 273 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 M0QZ24 198 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 CXCR6O00574 342 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 OR6A2O95222 327 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 OPN1SWP03999 348 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 CRYBA1P05813 215 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 ADORA3P0DMS8 318 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 KDELR2P33947 212 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 RASSF2P50749 326 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 CRYBA2P53672 197 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 NCALDP61601 193 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 HSF2Q03933 536 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 DNAL1Q4LDG9 190 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 LRRC23Q53EV4 343 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-215ENST00000583328 SPATA46Q5T0L3 261 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 THEM4Q5T1C6 240 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 LRFN4Q6PJG9 635 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 SLC35D2Q76EJ3 337 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 KLHL36Q8N4N3 616 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 SPICQ8N5J4 248 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 SMYD1Q8NB12 490 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 OR5J2Q8NH18 312 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 ZNF566Q969W8 418 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 SLC7A6OSQ96CW6 309 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-215ENST00000583328 DIRC2Q96SL1 478 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 RSPO3Q9BXY4 272 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-215ENST00000583328 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
TOP3A-215ENST00000583328 EIF3KQ9UBQ5 218 aaKnown RBP10.38□□□□□ -0.75
TOP3A-215ENST00000583328 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-215ENST00000583328 SOX21Q9Y651 276 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-215ENST00000583328 WNK1Q9H4A3 2382 aa10.38□□□□□ -0.75
TOP3A-215ENST00000583328 NOTCH1P46531 2555 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 VWFP04275 2813 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 EBAG9O00559 213 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 TIMM23O14925 209 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 GYG2O15488 501 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 TPST1O60507 370 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 GMNNO75496 209 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 IGHV2-70P01814 119 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 QDPRP09417 244 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 CD247P20963 164 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 MPV17P39210 176 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 SLC6A9P48067 706 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 MMP15P51511 669 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 OR1Q1Q15612 314 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 DUSP7Q16829 419 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 CYBRD1Q53TN4 286 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 ZNF362Q5T0B9 420 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-215ENST00000583328 BRICD5Q6PL45 260 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 PARP8Q8N3A8 854 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 GPR32P1Q8NGA4 272 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 OR4F5Q8NH21 305 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 WFDC12Q8WWY7 111 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 GEMIN6Q8WXD5 167 aaKnown RBP10.37□□□□□ -0.75
TOP3A-215ENST00000583328 UBE2FQ969M7 185 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 BTBD10Q9BSF8 475 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 CYSLTR2Q9NS75 346 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 DCAF16Q9NXF7 216 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-215ENST00000583328 MAGEL2Q9UJ55 1249 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 BAG5Q9UL15 447 aa10.37□□□□□ -0.75
TOP3A-215ENST00000583328 FAM181BA6NEQ2 426 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 ZSCAN5BA6NJL1 495 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 MT-ATP6P00846 226 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 IGHV4-38-2P0DP08 117 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 NCK1P16333 377 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 LIPAP38571 399 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 RGS8P57771 180 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-215ENST00000583328 SEC61A1P61619 476 aaKnown RBP10.36□□□□□ -0.75
TOP3A-215ENST00000583328 PAX8Q06710 450 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 HNRNPA0Q13151 305 aaKnown RBP10.36□□□□□ -0.75
TOP3A-215ENST00000583328 MELKQ14680 651 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 SPRNQ5BIV9 151 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 OLFML2AQ68BL7 652 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 GLYATQ6IB77 296 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 UNQ6126/PRO20091Q6UXV3 157 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 COMTD1Q86VU5 262 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 LRRC18Q8N456 261 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 FAM156AQ8NDB6 213 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 IPCEF1Q8WWN9 437 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-215ENST00000583328 LZICQ8WZA0 190 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 FAM162AQ96A26 154 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 MARS2Q96GW9 593 aaKnown RBP10.36□□□□□ -0.75
TOP3A-215ENST00000583328 SLC25A44Q96H78 314 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-215ENST00000583328 ARHGDIGQ99819 225 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 KCNN2Q9H2S1 579 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 MUC13Q9H3R2 512 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 GORASP2Q9H8Y8 452 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms