RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 BIVMQ86UB2 503 aa3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 CTAGE6Q86UF2 777 aa3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 UBALD1Q8TB05 177 aa3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 NEUROG2Q9H2A3 272 aa3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 ZNF430Q9H8G1 570 aaPredicted RBP3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 CAMTA1Q9Y6Y1 1673 aa3.32□□□□□ -1.88
SMARCE1-219ENST00000583294 MAPK8IP3Q9UPT6 1336 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 IGLV4-60A0A075B6I1 120 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 NUPL2O15504 423 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 B4GALT5O43286 388 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 MRPL3P09001 348 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 RAB3BP20337 219 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 DCKP27707 260 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 RRM2P31350 389 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 CEACAM3P40198 252 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 CHRNA6Q15825 494 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 SNRNP35Q16560 246 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 THEM4Q5T1C6 240 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 NANOGP8Q6NSW7 305 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 REEP3Q6NUK4 255 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 CERS6Q6ZMG9 384 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 SLC16A14Q7RTX9 510 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 RIMKLAQ8IXN7 391 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 PRSS58Q8IYP2 241 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 CMTM1Q8IZ96 169 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 OR4A4PQ8NGN8 299 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 SLC38A4Q969I6 547 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 ECHDC3Q96DC8 303 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 C12orf10Q9HB07 376 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 HRASLS2Q9NWW9 162 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 PTTG3PQ9NZH4 202 aa3.31□□□□□ -1.88
SMARCE1-219ENST00000583294 GPATCH8Q9UKJ3 1502 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 IGSF9BQ9UPX0 1349 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 KLHL41O60662 606 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 WISP3O95389 354 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 RHOXF2BP0C7M4 288 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 GPX4P36969 197 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 SLC1A1P43005 524 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 CSNK1EP49674 416 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 ARG2P78540 354 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 BEX3Q00994 111 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 RCAN2Q14206 197 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 RCN1Q15293 331 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 METTL21CQ5VZV1 264 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 C22orf42Q6IC83 251 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 FBXW12Q6X9E4 464 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 MBOAT1Q6ZNC8 495 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 IQCKQ8N0W5 287 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 CNPY4Q8N129 248 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 NOXO1Q8NFA2 376 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 ABHD3Q8WU67 409 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 RBMXL1Q96E39 390 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 C20orf24Q9BUV8 137 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 TMEM9BQ9NQ34 198 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 FAM49BQ9NUQ9 324 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 CTSFQ9UBX1 484 aa3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 ZNF282Q9UDV7 671 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-219ENST00000583294 NINLQ9Y2I6 1382 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 IGHV5-10-1A0A0J9YXX1 117 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 CCNB1P14635 433 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 F2RP25116 425 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 EIF3EP60228 445 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 STXBP1P61764 594 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 SYCNQ0VAF6 134 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 SELENBP1Q13228 472 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 PON2Q15165 354 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 OR7A5Q15622 319 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 PRMT9Q6P2P2 845 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 CAPSLQ8WWF8 208 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 FRZBQ92765 325 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 EEF1AKMT3Q96AZ1 226 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 ZNF681Q96N22 645 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 PANX1Q96RD7 426 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 PARP12Q9H0J9 701 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 SYNDIG1Q9H7V2 258 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 NEK6Q9HC98 313 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 ZNF160Q9HCG1 818 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 LGALS13Q9UHV8 139 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 VANGL2Q9ULK5 521 aa3.29□□□□□ -1.88
SMARCE1-219ENST00000583294 AKNAQ7Z591 1439 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 SIRPB1O00241 398 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 FKBP6O75344 327 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 RDH16O75452 317 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 RP2O75695 350 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 H6PDO95479 791 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 EIF4EP06730 217 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 ADRA2AP08913 450 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 UBTFL6P0CB48 400 aaPredicted RBP3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 IGHV1-8P0DP01 117 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 GGT1P19440 569 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 EIF2S2P20042 333 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 RAB10P61026 200 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 ESRRGP62508 458 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 XKR4Q5GH76 650 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 TMEM150AQ86TG1 271 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 BBS5Q8N3I7 341 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 OR2A1Q8NGT9 310 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 FAM81AQ8TBF8 368 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms