RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 SIRT4Q9Y6E7 314 aaPredicted RBP8.28□□□□□ -1.08
SS18-220ENST00000582092 PMF1-BGLAPU3KQ54 211 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 ZNF462Q96JM2 2506 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 IGHV3-15A0A0B4J1V0 119 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 TRAV1-2A0A0B4J238 106 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 A0A0J9YW62 118 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 SMIM30A4D0T7 59 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 FABP12A6NFH5 140 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 TTLL8A6PVC2 850 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 B4DXG7 233 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 HRGP04196 525 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 SP1P08047 785 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 OCM2P0CE71 109 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 HSD11B1P28845 292 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 SOX8P57073 446 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 PPIAP62937 165 aaKnown RBP8.27□□□□□ -1.09
SS18-220ENST00000582092 FMODQ06828 376 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 MFAP5Q13361 173 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 DOC2BQ14184 412 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 SLC10A1Q14973 349 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 ETFDHQ16134 617 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 SGCAQ16586 387 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 ZNF239Q16600 458 aaKnown RBP8.27□□□□□ -1.09
SS18-220ENST00000582092 TEX30Q5JUR7 227 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 LRRN1Q6UXK5 716 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 TMEM91Q6ZNR0 172 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 DCXRQ7Z4W1 244 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 SLC22A16Q86VW1 577 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 MCEMP1Q8IX19 187 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 GPR137CQ8N3F9 429 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 ZADH2Q8N4Q0 377 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 RFLNBQ8N5W9 214 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 PARP16Q8N5Y8 322 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 MINDY2Q8NBR6 621 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 FDCSPQ8NFU4 85 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 OR9K2Q8NGE7 335 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 GPR148Q8TDV2 347 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 CPNE4Q96A23 557 aaPredicted RBP8.27□□□□□ -1.09
SS18-220ENST00000582092 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
SS18-220ENST00000582092 SIGLEC12Q96PQ1 595 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 OR8B4Q96RC9 309 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 SMAD5Q99717 465 aaKnown RBP8.27□□□□□ -1.09
SS18-220ENST00000582092 PDCD1LG2Q9BQ51 273 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 ABHD6Q9BV23 337 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 OR2B2Q9GZK3 357 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 C1orf198Q9H425 327 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 PAQR5Q9NXK6 330 aaPredicted RBP8.27□□□□□ -1.09
SS18-220ENST00000582092 SLCO1C1Q9NYB5 712 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 CKLFQ9UBR5 152 aa8.27□□□□□ -1.09
SS18-220ENST00000582092 MRM2Q9UI43 246 aaKnown RBP8.27□□□□□ -1.09
SS18-220ENST00000582092 RP1L1Q8IWN7 2480 aaPredicted RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 ESPL1Q14674 2120 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ARPC4-TTLL3A0A0A6YYG9 625 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 A0A0G2JMM0 328 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 A0A1W2PPB8 328 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 A0A1W2PPK0 400 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 A0A1W2PRS3 328 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ISPDA4D126 451 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 FAM166BA8MTA8 275 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 KIR3DP1A8MWS1 328 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 LRRTM2O43300 516 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 TRAF3IP2O43734 574 aaPredicted RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 CXCL13O43927 109 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 FZD7O75084 574 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 SLC43A1O75387 559 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 CD2P06729 351 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 RFPL3SP0C7P2 107 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 RPS27P42677 84 aaKnown RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 MEOX1P50221 254 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 AGFG1P52594 562 aaKnown RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 CAV3P56539 151 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 SRYQ05066 204 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 Q499Y3 187 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 PYDC2Q56P42 97 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ZNF766Q5HY98 468 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 LRFN4Q6PJG9 635 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 DEGS2Q6QHC5 323 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ZNF704Q6ZNC4 412 aaPredicted RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 CREB3L2Q70SY1 520 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 TRILQ7L0X0 811 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 AAED1Q7RTV5 226 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 GALNTL5Q7Z4T8 443 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ZNF433Q8N7K0 673 aaPredicted RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 SLC26A10Q8NG04 563 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 OR2G2Q8NGZ5 317 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 OR52N5Q8NH56 324 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ZNF671Q8TAW3 534 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 C11orf40Q8WZ69 217 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 MCHR2Q969V1 340 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 TIMP4Q99727 224 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 BARHL1Q9BZE3 327 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ULBP2Q9BZM5 246 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 ABCB9Q9NP78 766 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 DEPPQ9NTK1 212 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 MRPL22Q9NWU5 206 aaKnown RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 GLTPQ9NZD2 209 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 B3GAT1Q9P2W7 334 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 PLEKHB1Q9UF11 243 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms