RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 CD1EP15812 388 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CTRB1P17538 263 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ARNTP27540 789 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CTRB2Q6GPI1 263 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 Q6ZRG5 221 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 H1FNTQ75WM6 255 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF321PQ8N8H1 164 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 DHRS9Q9BPW9 319 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF2Q9BSG1 426 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CMC2Q9NRP2 79 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CBY1Q9Y3M2 126 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 V9GYS6 101 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 NKX6-3A6NJ46 265 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 DEGS1O15121 323 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CTNSO60931 367 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 PSMB6P28072 239 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CD38P28907 300 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 EVX1P49640 407 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 FABP5Q01469 135 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 LYSMD1Q96S90 227 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 SEMA4CQ9C0C4 833 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 MOB1AQ9H8S9 216 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 TRIM77I1YAP6 450 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 IGFBP1P08833 259 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 SLC2A1P11166 492 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CHRNB4P30926 498 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 EGR3Q06889 387 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 C17orf99Q6UX52 265 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 C17orf107Q6ZR85 190 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ZFP62Q8NB50 900 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF740Q8NDX6 193 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 RHBDD1Q8TEB9 315 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 C12orf57Q99622 126 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 OR6C68A6NDL8 312 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 OR5K3A6NET4 321 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 XRCC3O43542 346 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 EIF4E2O60573 245 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 SOX18P35713 384 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ACSM5Q6NUN0 579 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF485Q8NCK3 441 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 FAM103A1Q9BTL3 118 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 HEYLQ9NQ87 328 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 FLVCR2Q9UPI3 526 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 CRYBG1Q9Y4K1 1723 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 AKR7A2O43488 359 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ZP3P21754 424 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 TGM1P22735 817 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 DCDP81605 110 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ARL16Q0P5N6 197 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 NECAP1Q8NC96 275 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 OR51I2Q9H344 312 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 LOC107986453A0A1B0GWG9 222 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 C4orf47A7E2U8 309 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 BCL2L11O43521 198 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 B3GALNT1O75752 331 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ALOX5APP20292 161 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 PTAFRP25105 342 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 PRAMEF20Q5VT98 475 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 PLXDC2Q6UX71 529 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 SYT13Q7L8C5 426 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 GRAMD2AQ8IUY3 354 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 PTDSS2Q9BVG9 487 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 TM7SF3Q9NS93 570 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 MRPL22Q9NWU5 206 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 FITM1A5D6W6 292 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 HSPB2A8KAH6 182 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 CTXN2P0C2S0 81 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 OR4E1P0C645 316 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 IL3RAP26951 378 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 GSK3AP49840 483 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 OR10A3P58181 314 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 HSPB2Q16082 182 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 TBC1D28Q2M2D7 210 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 CCSMST1Q4G0I0 132 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 FAM74A1Q5RGS3 127 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 LDLRAD1Q5T700 205 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF561Q8N587 486 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF775Q96BV0 537 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 SEH1LQ96EE3 360 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 CALHM2Q9HA72 323 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 SLC25A37Q9NYZ2 338 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ANGPTL6Q8NI99 470 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 Q96M85 177 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 DUSP21Q9H596 190 aa13.31□□□□□ -0.28
CSNK1D-217ENST00000581241 ABHD16AO95870 558 aa13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 CD80P33681 288 aa13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 SNRPNP63162 240 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 MRPS21P82921 87 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 RNF212Q495C1 297 aa13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 LHFPL2Q6ZUX7 228 aa13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 KLHDC9Q8NEP7 349 aa13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 BPIFCQ8NFQ6 507 aa13.3□□□□□ -0.28
CSNK1D-217ENST00000581241 FGF13Q92913 245 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms