RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 UBE3DQ7Z6J8 389 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 OR4C3Q8NH37 302 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 SGCZQ96LD1 299 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 HHIPQ96QV1 700 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 C12orf57Q99622 126 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 KCNK15Q9H427 330 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 GNB3P16520 340 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 RPL27P61353 136 aaKnown RBP12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 NKX6-1P78426 367 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 ZNF85Q03923 595 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 ARL6IP1Q15041 203 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 C1orf140Q5VVS0 124 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 COMTD1Q86VU5 262 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 OR56B1Q8NGI3 324 aa12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 UNKLQ9H9P5 680 aaKnown RBP12.37□□□□□ -0.43
TRAPPC8-207ENST00000580104 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 IGHG1P01857 330 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 ALOX5APP20292 161 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 CPT2P23786 658 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 HRH1P35367 487 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 AKR1C3P42330 323 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 HNF4GQ14541 408 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 CLINT1Q14677 625 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 MLF2Q15773 248 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 CA13Q8N1Q1 262 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 SLC43A2Q8N370 569 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 OR14A16Q8NHC5 309 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 KCNG3Q8TAE7 436 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 MARCH1Q8TCQ1 289 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 CEP290O15078 2479 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 MGMTP16455 207 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 PSMB6P28072 239 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 FLI1Q01543 452 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 AGBL4Q5VU57 503 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 TMEM71Q6P5X7 295 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 SIGLEC11Q96RL6 698 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 TMEM200CA6NKL6 621 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 RRASP10301 218 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 DUSP2Q05923 314 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 PAN3Q58A45 887 aaKnown RBP12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 TCTN2Q96GX1 697 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 FBRSQ9HAH7 460 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 LTBP4Q8N2S1 1624 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 A0A0B4J2E0 115 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 A0A1B0GX12 115 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 MCRIP1C9JLW8 97 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 CTSVO60911 334 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 ATG12O94817 140 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 CX3CR1P49238 355 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 PLA1AQ53H76 456 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 OR52W1Q6IF63 320 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 ADGRG3Q86Y34 549 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 OR2L13Q8N349 312 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 ARIH2OSQ8N7S6 290 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 PIGTQ969N2 578 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 CMSS1Q9BQ75 279 aaKnown RBP12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 SEMA6CQ9H3T2 930 aa12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 FAM212BQ9NTI7 297 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC8-207ENST00000580104 PRAMEF27A3QJZ7 478 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 RD3LP0DJH9 198 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 GALP22466 123 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 CSNK1A1P48729 337 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 FBXW12Q6X9E4 464 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 CLRN3Q8NCR9 226 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 FAM71CQ8NEG0 241 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 JAM3Q9BX67 310 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 TAF9BQ9HBM6 251 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 CBX7O95931 251 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 CHATP28329 748 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 ZNF709Q8N972 641 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 SPTSSAQ969W0 71 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 TEX101Q9BY14 249 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 ENKD1Q9H0I2 346 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 NTMQ9P121 344 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 URGCP-MRPS24S4R325 110 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 GLSO94925 669 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 AKR7A3O95154 331 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 IGHA1P01876 353 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 OR13C7P0DN81 318 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 CRYBA2P53672 197 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 TAS2R46P59540 309 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 PRAMEF20Q5VT98 475 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 SUMF1Q8NBK3 374 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 MRPS2Q9Y399 296 aaKnown RBP12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 PCYT1BQ9Y5K3 369 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 A0A087WV62 115 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 A8MVM7 634 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 IDH3GP51553 393 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 MTCP1P56278 107 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 PRTGQ2VWP7 1150 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 RNLSQ5VYX0 342 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 CCDC71LQ8N9Z2 235 aa12.35□□□□□ -0.43
TRAPPC8-207ENST00000580104 OR51E1Q8TCB6 317 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms