RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 HCCSP53701 268 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 H2BFSP57053 126 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 NANOS3P60323 173 aaKnown RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 ACTR1AP61163 376 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ERVK-25P63136 954 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 IGLV3-21P80748 117 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 BTN1A1Q13410 526 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 SERTAD2Q14140 314 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ICAM4Q14773 271 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ZNF169Q14929 603 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 KIR2DS5Q14953 304 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ZNF74Q16587 644 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 CR1LQ2VPA4 569 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ALG10Q5BKT4 473 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 VWA2Q5GFL6 755 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PHF19Q5T6S3 580 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 LINC01590Q5TEZ4 76 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 LIPNQ5VXI9 398 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ZNF660Q6AZW8 331 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 TBC1D3CQ6IPX1 549 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ARMC6Q6NXE6 501 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 STEAP1BQ6NZ63 245 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 TMEM205Q6UW68 189 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ENPP7Q6UWV6 458 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ALKAL2Q6UX46 152 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 NDUFAF7Q7L592 441 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 FAM122BQ7Z309 247 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 TBC1D3Q8IZP1 549 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 MUC20Q8N307 709 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 KCNRGQ8N5I3 272 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 C12orf45Q8N5I9 185 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 C10orf53Q8N6V4 93 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 LRRC75AQ8NAA5 344 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 AVL9Q8NBF6 648 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ZBTB44Q8NCP5 570 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 CLRN3Q8NCR9 226 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 OR51L1Q8NGJ5 315 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 OR5M8Q8NGP6 311 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 OR10Z1Q8NGY1 313 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 OR2G2Q8NGZ5 317 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 OR10G6Q8NH81 332 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 OR1S1Q8NH92 325 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 GPX8Q8TED1 209 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 TSEN15Q8WW01 171 aaKnown RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 MCHR2Q969V1 340 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ANKRD9Q96BM1 317 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 C3orf49Q96BT1 292 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 FOXRED1Q96CU9 486 aaPredicted RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 RASD2Q96D21 266 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 CXorf58Q96LI9 332 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 C4orf45Q96LM5 186 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 DGAT2Q96PD7 388 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 GABRG3Q99928 467 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PRRT1Q99946 306 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 NUDT16L1Q9BRJ7 211 aaKnown RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 TTTY10Q9BZA0 68 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PIGMQ9H3S5 423 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 IFT46Q9NQC8 304 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PCDHB16Q9NRJ7 776 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 UBQLN4Q9NRR5 601 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 FBXO34Q9NWN3 711 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 SLC2A8Q9NY64 477 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 RASL12Q9NYN1 266 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 SERGEFQ9UGK8 458 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 MRM2Q9UI43 246 aaKnown RBP4.78□□□□□ -1.64
CDH8-206ENST00000580044 IKZF2Q9UKS7 526 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PLCL2Q9UPR0 1127 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ERVK-19Q9WJR5 959 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PLEKHA6Q9Y2H5 1048 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PRELID3BQ9Y3B1 194 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ADAM18Q9Y3Q7 739 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 OR10H1Q9Y4A9 318 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 PLEKHM1Q9Y4G2 1056 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 ATG2AQ2TAZ0 1938 aa4.78□□□□□ -1.64
CDH8-206ENST00000580044 EML5Q05BV3 1969 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 TRAV18A0A075B6X5 111 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 A0A1B0GTI1 187 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 A0A1B0GVT2 93 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 RAB19A4D1S5 217 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 METTL21EPA6NDL7 271 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 ZNF860A6NHJ4 632 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 SCDO00767 359 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 XKRYO14609 159 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 MAGEB4O15481 346 aaPredicted RBP4.77□□□□□ -1.65
CDH8-206ENST00000580044 NDUFA2O43678 99 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 RDH16O75452 317 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 RAB3DO95716 219 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 CYB5AP00167 134 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 MAS1P04201 325 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 CD74P04233 296 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 CT62P0C5K7 136 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 OR4E1P0C645 316 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 ALOX5APP20292 161 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 CSRP1P21291 193 aaKnown RBP4.77□□□□□ -1.65
CDH8-206ENST00000580044 S1PR1P21453 382 aa4.77□□□□□ -1.65
CDH8-206ENST00000580044 CNR1P21554 472 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms