RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 COA3Q9Y2R0 106 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-207ENST00000579329 NSD1Q96L73 2696 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-207ENST00000579329 SCG5P05408 212 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 HIST1H1CP16403 213 aaKnown RBP20.62■□□□□ 0.89
LIMD2-207ENST00000579329 STOMP27105 288 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 PPOXP50336 477 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 EFNA4P52798 201 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 CLEC12AQ5QGZ9 265 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 UGT2A3Q6UWM9 527 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 GLB1L2Q8IW92 636 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 OR4K13Q8NH42 304 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 GIPC3Q8TF64 312 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 FOXN4Q96NZ1 517 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 NMNAT3Q96T66 252 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 WNT5BQ9H1J7 359 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 MMADHCQ9H3L0 296 aaPredicted RBP20.62■□□□□ 0.89
LIMD2-207ENST00000579329 FKBP7Q9Y680 259 aa20.62■□□□□ 0.89
LIMD2-207ENST00000579329 FKBP6O75344 327 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 FAM157BP0CG42 384 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 PCSK6P29122 969 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 EVX1P49640 407 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 GDI2P50395 445 aaKnown RBP20.61■□□□□ 0.89
LIMD2-207ENST00000579329 SCRN3Q0VDG4 424 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 TNK1Q13470 666 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 DNM1P46Q6ZS02 220 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 BIVMQ86UB2 503 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 CIARTQ8N365 385 aaPredicted RBP20.61■□□□□ 0.89
LIMD2-207ENST00000579329 DOK1Q99704 481 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 VRK1Q99986 396 aaPredicted RBP20.61■□□□□ 0.89
LIMD2-207ENST00000579329 MRPL37Q9BZE1 423 aaKnown RBP20.61■□□□□ 0.89
LIMD2-207ENST00000579329 DYNLRB1Q9NP97 96 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 TBC1D23Q9NUY8 699 aa20.61■□□□□ 0.89
LIMD2-207ENST00000579329 TMEM129A0AVI4 362 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 ARRDC5A6NEK1 342 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 BHLHE40O14503 412 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 RAD52P43351 418 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 LSM6P62312 80 aaKnown RBP20.6■□□□□ 0.89
LIMD2-207ENST00000579329 CBX1P83916 185 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 MSMPQ1L6U9 139 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 RGS7BPQ6MZT1 257 aaPredicted RBP20.6■□□□□ 0.89
LIMD2-207ENST00000579329 PAPD5Q8NDF8 572 aaKnown RBP20.6■□□□□ 0.89
LIMD2-207ENST00000579329 SDR9C7Q8NEX9 313 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 POM121L2Q96KW2 1035 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 TSSK2Q96PF2 358 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 SORCS2Q96PQ0 1159 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 PLA2G12AQ9BZM1 189 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 BCL2L14Q9BZR8 327 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 RACGAP1Q9H0H5 632 aa20.6■□□□□ 0.89
LIMD2-207ENST00000579329 ARFGEF3Q5TH69 2177 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 IGLV1-36A0A0B4J1U3 117 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 SMAD7O15105 426 aaKnown RBP20.59■□□□□ 0.89
LIMD2-207ENST00000579329 CCNOP22674 350 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 CENPAP49450 140 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 ERFP50548 548 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 UCP2P55851 309 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 DSCR9P59020 149 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.59■□□□□ 0.89
LIMD2-207ENST00000579329 AQP6Q13520 282 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 SLC35F1Q5T1Q4 408 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 ZNF774Q6NX45 483 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 CLEC2AQ6UVW9 174 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 OR52E2Q8NGJ4 325 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 OR8D4Q8NGM9 314 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 TSSK6Q9BXA6 273 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 RAB1BQ9H0U4 201 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 OR51B6Q9H340 312 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 SRA1Q9HD15 236 aaKnown RBP20.59■□□□□ 0.89
LIMD2-207ENST00000579329 RPRD1BQ9NQG5 326 aaKnown RBP20.59■□□□□ 0.89
LIMD2-207ENST00000579329 B9D1Q9UPM9 204 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 BAIAP2Q9UQB8 552 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 FBN3Q75N90 2809 aa20.59■□□□□ 0.89
LIMD2-207ENST00000579329 LOC100509620A0A075B734 347 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 C5orf49A4QMS7 147 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 DCTN6O00399 190 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 E2F6O75461 281 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 SOX14O95416 240 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 F12P00748 615 aaPredicted RBP20.58■□□□□ 0.89
LIMD2-207ENST00000579329 ERCC1P07992 297 aaPredicted RBP20.58■□□□□ 0.89
LIMD2-207ENST00000579329 CSF3P09919 207 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 COX10Q12887 443 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 KCNMB1Q16558 191 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 UNQ6126/PRO20091Q6UXV3 157 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 CD300LDQ6UXZ3 194 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 OR6V1Q8N148 313 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 C11orf40Q8WZ69 217 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 FEVQ99581 238 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 SYT3Q9BQG1 590 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 RHNO1Q9BSD3 238 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 PDP1Q9P0J1 537 aaPredicted RBP20.58■□□□□ 0.89
LIMD2-207ENST00000579329 EIF3KQ9UBQ5 218 aaKnown RBP20.58■□□□□ 0.89
LIMD2-207ENST00000579329 DNAJB9Q9UBS3 223 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 NDRG4Q9ULP0 352 aaKnown RBP20.58■□□□□ 0.89
LIMD2-207ENST00000579329 POLR1DQ9Y2S0 133 aa20.58■□□□□ 0.89
LIMD2-207ENST00000579329 FAM171A2A8MVW0 826 aa20.57■□□□□ 0.88
LIMD2-207ENST00000579329 SGCEO43556 437 aa20.57■□□□□ 0.88
LIMD2-207ENST00000579329 SYNGR3O43761 229 aa20.57■□□□□ 0.88
LIMD2-207ENST00000579329 DOK2O60496 412 aa20.57■□□□□ 0.88
LIMD2-207ENST00000579329 MPZL1O95297 269 aa20.57■□□□□ 0.88
LIMD2-207ENST00000579329 LCKP06239 509 aa20.57■□□□□ 0.88
LIMD2-207ENST00000579329 GAAP10253 952 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms