RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SYNPRQ8TBG9 265 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 GIPC3Q8TF64 312 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 SNX33Q8WV41 574 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 CANT1Q8WVQ1 401 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 OTULINQ96BN8 352 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 DHRS1Q96LJ7 313 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 NMNAT3Q96T66 252 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 GPA33Q99795 319 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF416Q9BWM5 594 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 BCL2L14Q9BZR8 327 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 OR2H1Q9GZK4 316 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 NUAK2Q9H093 628 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 OR52D1Q9H346 318 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF224Q9NZL3 707 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 REV1Q9UBZ9 1251 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 SLC7A8Q9UHI5 535 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 COA3Q9Y2R0 106 aaPredicted RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 GRIP1Q9Y3R0 1128 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 UGT2A1Q9Y4X1 527 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 LYVE1Q9Y5Y7 322 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 HIVEP2P31629 2446 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 IGKV1D-43A0A0B4J1Z2 117 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PLSCR5A0PG75 271 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 RIIAD1A6NNX1 92 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 M0R233 179 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 IMPA2O14732 288 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ACOT8O14734 319 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 GSC2O15499 205 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 SGCEO43556 437 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 GPRIN2O60269 458 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 MPZL1O95297 269 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 LY6G6DO95868 133 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 CSF3P09919 207 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 APEHP13798 732 aaKnown RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 DAOP14920 347 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 HIST1H1CP16403 213 aaKnown RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 CTLA4P16410 223 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF823P16415 610 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 POU1F1P28069 291 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PCSK6P29122 969 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ALDH3B1P43353 468 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 HTR5AP47898 357 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 GSSP48637 474 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 EVX1P49640 407 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PPOXP50336 477 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PDLIM4P50479 330 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF133P52736 654 aaPredicted RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PPP2R2BQ00005 443 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 GLO1Q04760 184 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 SCRN3Q0VDG4 424 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ALKBH6Q3KRA9 238 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF718Q3SXZ3 478 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 SLC36A3Q495N2 470 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 SPATA46Q5T0L3 261 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PGBD2Q6P3X8 592 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 UGT2A3Q6UWM9 527 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 FAM122BQ7Z309 247 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 SYT9Q86SS6 491 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PAQR4Q8N4S7 273 aaPredicted RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF540Q8NDQ6 660 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PROKR2Q8NFJ6 384 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 OR9Q2Q8NGE9 314 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 OR1J1Q8NGS3 322 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 OR2AJ1Q8NGZ0 328 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ABHD4Q8TB40 342 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 MRPL24Q96A35 216 aaKnown RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 NABP1Q96AH0 204 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 NMD3Q96D46 503 aaKnown RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 COX4I2Q96KJ9 171 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 TSSK2Q96PF2 358 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 GPX7Q96SL4 187 aaPredicted RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 DOK1Q99704 481 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PIMREGQ9BSJ6 248 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 FUZQ9BT04 418 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 WACQ9BTA9 647 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 TSSK6Q9BXA6 273 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 TEX12Q9BXU0 123 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 MRPL37Q9BZE1 423 aaKnown RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 TPK1Q9H3S4 243 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 EGLN3Q9H6Z9 239 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ELOVL3Q9HB03 270 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 RPRD1BQ9NQG5 326 aaKnown RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 POLE4Q9NR33 117 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 DLL4Q9NR61 685 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 DECR2Q9NUI1 292 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 TBC1D23Q9NUY8 699 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 SLCO1C1Q9NYB5 712 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PLEK2Q9NYT0 353 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 PDP1Q9P0J1 537 aaPredicted RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 TAAR3PQ9P1P4 343 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 ASH2LQ9UBL3 628 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 NDRG4Q9ULP0 352 aaKnown RBP5.65□□□□□ -1.5
TRAF4-213ENST00000578917 CDH10Q9Y6N8 788 aa5.65□□□□□ -1.5
TRAF4-213ENST00000578917 DSCAMO60469 2012 aa5.65□□□□□ -1.51
TRAF4-213ENST00000578917 LOC100509620A0A075B734 347 aa5.64□□□□□ -1.51
TRAF4-213ENST00000578917 IGHV4-30-2A0A087WSY4 118 aa5.64□□□□□ -1.51
TRAF4-213ENST00000578917 LOC390937A0A1W2PQ73 354 aa5.64□□□□□ -1.51
TRAF4-213ENST00000578917 ARPC3O15145 178 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms