RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	AKAP8	O43823	692 aa	Known RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	KRT34	O76011	436 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF205	O95201	554 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RAB36	O95755	333 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PNP	P00491	289 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IGHG1	P01857	330 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LCK	P06239	509 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CST2	P09228	141 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IGHV4-38-2	P0DP08	117 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IFI30	P13284	250 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NCK1	P16333	377 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF12	P17014	697 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	KITLG	P21583	273 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	GTF2E2	P29084	291 aa	Known RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CDKN2A	P42771	156 aa	Known RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	GPR4	P46093	362 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OMP	P47874	163 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SLC6A9	P48067	706 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF81	P51508	661 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RPL27	P61353	136 aa	Known RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PPP1CB	P62140	327 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	UBA52	P62987	128 aa	Known RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SELENOW	P63302	87 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LCN2	P80188	198 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RELB	Q01201	579 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PAX8	Q06710	450 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TOP3A	Q13472	1001 aa	Predicted RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	HLX	Q14774	488 aa	Predicted RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SGCA	Q16586	387 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MEP1B	Q16820	701 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	AWAT1	Q58HT5	328 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	COQ5	Q5HYK3	327 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	METTL21C	Q5VZV1	264 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LYPD2	Q6UXB3	125 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF841	Q6ZN19	808 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	COLCA1	Q6ZS62	124 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TMPRSS11F	Q6ZWK6	438 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	USP43	Q70EL4	1123 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	VASH1	Q7L8A9	365 aa	Predicted RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	GLCCI1	Q86VQ1	547 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LRRC28	Q86X40	367 aa	Predicted RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OFCC1	Q8IZS5	231 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	FGFRL1	Q8N441	504 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF283	Q8N7M2	679 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SIGLECL1	Q8N7X8	197 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OR51F2	Q8NH61	342 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	OR51A7	Q8NH64	312 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SLC7A13	Q8TCU3	470 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZFAND2B	Q8WV99	257 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RCN3	Q96D15	328 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RASD2	Q96D21	266 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	BPIFA2	Q96DR5	249 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	FAHD2A	Q96GK7	314 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DHRS1	Q96LJ7	313 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PRRC1	Q96M27	445 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DUX5	Q96PT3	197 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PPP1R3E	Q9H7J1	279 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	EVA1A	Q9H8M9	152 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TMEM165	Q9HC07	324 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	B3GAT2	Q9NPZ5	323 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NRIP3	Q9NQ35	241 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	INTS9	Q9NV88	658 aa	Known RBP	3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NDUFAF4	Q9P032	175 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IL20RA	Q9UHF4	553 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CORO2B	Q9UQ03	480 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SIGLEC7	Q9Y286	467 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LHFPL6	Q9Y693	200 aa		3.73	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DOCK11	Q5JSL3	2073 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PPIAL4E	A0A075B759	164 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329		A0A0A6YYJ9	748 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PPIAL4C	A0A0B4J2A2	164 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	IGHV3-64D	A0A0J9YX35	117 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DNAJC9-AS1	A6NH13	148 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	HMGB1P1	B2RPK0	211 aa	Predicted RBP	3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	C22orf46	C9J442	243 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PPIAL4D	F5H284	164 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TMEM178B	H3BS89	294 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ANGPT2	O15123	496 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RER1	O15258	196 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	DIRAS1	O95057	198 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TXNDC12	O95881	172 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PLAT	P00750	562 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	WNT2	P09544	360 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	PPIAL4F	P0DN26	164 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	UMPS	P11172	480 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	AMY2B	P19961	511 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	GGT2	P36268	569 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	SRP14	P37108	136 aa	Known RBP	3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	GSK3B	P49841	420 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MMP16	P51512	607 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	RAD23A	P54725	363 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CLRN1	P58418	232 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	TAS2R41	P59536	307 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	CTXN1	P60606	82 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	NCALD	P61601	193 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	GUCY1A3	Q02108	690 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	LIPE	Q05469	1076 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	ZNF154	Q13106	437 aa		3.72	□□□□□ -1.81
PPP4R1-209	ENST00000578329	MAB21L1	Q13394	359 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms