RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 IGHV2-70DA0A0C4DH43 119 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 KIR2DS1A0A191URI9 304 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC22A31A6NKX4 558 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 CPSF4LA6NMK7 179 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 TMEM178BH3BS89 294 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 NDUFA7O95182 113 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 LYPD3O95274 346 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 PRB2P02812 416 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 HIST1H2ABP04908 130 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 ASAH2BP0C7U1 165 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 IDO1P14902 403 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 ACADSP16219 412 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 HOXB9P17482 250 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 TNFRSF1AP19438 455 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 MDH2P40926 338 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 GNB2P62879 340 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 MRPS34P82930 218 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 HLXQ14774 488 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 NPTX1Q15818 432 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 DUSP7Q16829 419 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 ENTPD8Q5MY95 495 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 C10orf128Q5T292 105 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 RUSC1-AS1Q66K80 236 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 TTC33Q6PID6 262 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 UNQ6126/PRO20091Q6UXV3 157 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 MSANTD1Q6ZTZ1 278 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 HIST3H2AQ7L7L0 130 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 RANBP3LQ86VV4 465 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 TSPYL5Q86VY4 417 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 KRT73Q86Y46 540 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 KLBQ86Z14 1044 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 MSRB3Q8IXL7 192 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 NOXO1Q8NFA2 376 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 LINC01006Q8NI28 216 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF420Q8TAQ5 688 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 HIST1H2ACQ93077 130 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 DACT3Q96B18 629 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 TLCD1Q96CP7 247 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 ATP6V1G3Q96LB4 118 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 C4orf45Q96LM5 186 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 PAIP2Q9BPZ3 127 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 WNT5BQ9H1J7 359 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 RAD21L1Q9H4I0 556 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 SDR39U1Q9NRG7 319 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 ZIM2Q9NZV7 527 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 CGGBP1Q9UFW8 167 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 UGT2A1Q9Y4X1 527 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 DOCK11Q5JSL3 2073 aa8.45□□□□□ -1.06
NPLOC4-220ENST00000576940 TRPC5OSA6NMA1 111 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 MCIDASD6RGH6 385 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 G3V4G9 280 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 HDAC3O15379 428 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 CHP2O43745 196 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 FMO6PO60774 539 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SERPINB7O75635 380 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 CYB5R3P00387 301 aaPredicted RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 MELTFP08582 738 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 RPS2P15880 293 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 TNFSF4P23510 183 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 LAP3P28838 519 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 AQP2P41181 271 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ERFP50548 548 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF133P52736 654 aaPredicted RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC18A1P54219 525 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 UGT2B15P54855 530 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 FMODQ06828 376 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 RPL18Q07020 188 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SCARB2Q14108 478 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 TAF11Q15544 211 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ZMAT1Q5H9K5 638 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 FAM201AQ5SY85 155 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SWT1Q5T5J6 900 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 FAM27BQ5VT28 67 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC27A4Q6P1M0 643 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF613Q6PF04 617 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ARMC8Q8IUR7 673 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ALDH16A1Q8IZ83 802 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 KIRREL3Q8IZU9 778 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 OR4D11Q8NGI4 311 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 OR6T1Q8NGN1 323 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ASB10Q8WXI3 467 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 HDAC2Q92769 488 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 CMBLQ96DG6 245 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 THOC1Q96FV9 657 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 OR2V2Q96R30 315 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 OR52B2Q96RD2 323 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF607Q96SK3 696 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SEPHS2Q99611 448 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC30A2Q9BRI3 323 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 NUDT16L1Q9BRJ7 211 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 OR2H1Q9GZK4 316 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 IKZF5Q9H5V7 419 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 TCF7L1Q9HCS4 588 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 GCM1Q9NP62 436 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 KCNK9Q9NPC2 374 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 SLCO1B3Q9NPD5 702 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 NOX4Q9NPH5 578 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ASH2LQ9UBL3 628 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 IL19Q9UHD0 177 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF229Q9UJW7 825 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms