RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NMNAT3Q96T66 252 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 DDOQ99489 341 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 ALG12Q9BV10 488 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 SYT4Q9H2B2 425 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 UBTD1Q9HAC8 227 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 IL20Q9NYY1 176 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 PDP1Q9P0J1 537 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 CRNNQ9UBG3 495 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 GRHPRQ9UBQ7 328 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 PLEKHA6Q9Y2H5 1048 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 AMDHD2Q9Y303 409 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 AP4S1Q9Y587 144 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 CDH10Q9Y6N8 788 aa8.21□□□□□ -1.1
NPLOC4-219ENST00000576713 SPG11Q96JI7 2443 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 MYO9AB2RTY4 2548 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 IGLV1-36A0A0B4J1U3 117 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 OR6C68A6NDL8 312 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 CENPBD1B2RD01 187 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 E7EQL1 145 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 ATP6V1G2-DDX39BF2Z307 99 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 GNGT2O14610 69 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 MGRN1O60291 552 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 MITFO75030 526 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 ENTPD5O75356 428 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 SOD3P08294 240 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 MMP7P09237 267 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF14P17017 642 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 CD53P19397 219 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 DAPP51397 102 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 IDH3GP51553 393 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 TAF11Q15544 211 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 ATP6AP1Q15904 470 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 PGGHGQ32M88 737 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 SLC36A3Q495N2 470 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 SHQ1Q6PI26 577 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 PAMR1Q6UXH9 720 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 CD300LDQ6UXZ3 194 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 LRRC18Q8N456 261 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 PAQR4Q8N4S7 273 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 CYB561A3Q8NBI2 242 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 SDR9C7Q8NEX9 313 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 OR4K13Q8NH42 304 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 AKAP1Q92667 903 aaKnown RBP eCLIP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 SLC38A2Q96QD8 506 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 PKP2Q99959 881 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 IFT27Q9BW83 186 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 NUAK2Q9H093 628 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 SEMA6AQ9H2E6 1030 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 SMURF2Q9HAU4 748 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 EMC7Q9NPA0 242 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 KRCC1Q9NPI7 259 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 B3GAT2Q9NPZ5 323 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 VSX1Q9NZR4 365 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 ST6GALNAC2Q9UJ37 374 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 MOKQ9UQ07 419 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 MGAT4BQ9UQ53 548 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 POFUT2Q9Y2G5 429 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 RNF115Q9Y4L5 304 aa8.2□□□□□ -1.1
NPLOC4-219ENST00000576713 CREBBPQ92793 2442 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 A0A1W2PPL8 197 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 ARRDC5A6NEK1 342 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 A6NIZ1 184 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 FAM171A2A8MVW0 826 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 ARPC3O15145 178 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 SLC16A7O60669 478 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 E2F6O75461 281 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 CIB2O75838 187 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 GOSR1O95249 250 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 DANCRP0C864 163 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 CLUP10909 449 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 CD79AP11912 226 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 CCL2P13500 99 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 CBR1P16152 277 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 LAP3P28838 519 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 EPHA2P29317 976 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 SLC6A6P31641 620 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 IFNGR2P38484 337 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 CAPZA2P47755 286 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 NR1H2P55055 460 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 UBE2NP61088 152 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 RAP1BP61224 184 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 RAP1AP62834 184 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 MRPS34P82930 218 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 HGFACQ04756 655 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 ENDOGQ14249 297 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 RAB39AQ14964 217 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 MEP1BQ16820 701 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF672Q499Z4 452 aaPredicted RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 THEM4Q5T1C6 240 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 TMEM236Q5W0B7 351 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 ACSM5Q6NUN0 579 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 FAHD1Q6P587 224 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 LEG1Q6P5S2 330 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 YTHDF3Q7Z739 585 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 OR6V1Q8N148 313 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 LINC00471Q8N535 108 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 NPEPL1Q8NDH3 523 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 POP5Q969H6 163 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 JAM3Q9BX67 310 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 TSSK6Q9BXA6 273 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms