RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FAM91A1Q658Y4 838 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 C5orf46Q6UWT4 87 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 NET1Q7Z628 596 aaPredicted RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 ARMC8Q8IUR7 673 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ZNF584Q8IVC4 421 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 SKA3Q8IX90 412 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 PAQR4Q8N4S7 273 aaPredicted RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 ZNF540Q8NDQ6 660 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ADPRHL1Q8NDY3 354 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 OR6T1Q8NGN1 323 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 VANGL1Q8TAA9 524 aaPredicted RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 LRRC8CQ8TDW0 803 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 TMEM54Q969K7 222 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 YIPF5Q969M3 257 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 MRPL24Q96A35 216 aaKnown RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 CLPTM1LQ96KA5 538 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 C7orf26Q96N11 449 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ANKRD27Q96NW4 1050 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ZNF317Q96PQ6 595 aaPredicted RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 TSPAN32Q96QS1 320 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ARHGDIGQ99819 225 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 SH3GL3Q99963 347 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 CCDC28BQ9BUN5 200 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 MRI1Q9BV20 369 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 SPATA5L1Q9BVQ7 753 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 OR51B6Q9H340 312 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 TMEM38AQ9H6F2 299 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 LPAR2Q9HBW0 351 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 MYOZ1Q9NP98 299 aaPredicted RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 MRPL39Q9NYK5 338 aaKnown RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 TAS2R5Q9NYW4 299 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 SELENONQ9NZV5 590 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 SLC13A4Q9UKG4 626 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 BLOC1S6Q9UL45 172 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 N6AMT1Q9Y5N5 214 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 NOX1Q9Y5S8 564 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 SVEP1Q4LDE5 3571 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 STAB1Q9NY15 2570 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ANK2Q01484 3957 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 PRORSD1PA6NEY8 169 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 EVPLLA8MZ36 301 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 FAM157AC9JC47 383 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 SYNGR3O43761 229 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 SERPINB7O75635 380 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 NCR1O76036 304 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 TGDSO95455 350 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 RAB36O95755 333 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 CLPTM1O96005 669 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ERCC1P07992 297 aaPredicted RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 TNFRSF1BP20333 461 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 HNF1AP20823 631 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 PPIBP23284 216 aaKnown RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 GLRXP35754 106 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 SRP14P37108 136 aaKnown RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 CRYBA2P53672 197 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 CDH15P55291 814 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ERVS71-1P61550 626 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 MYBPC1Q00872 1141 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 RUNX1T1Q06455 604 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 HNRNPA0Q13151 305 aaKnown RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 SQLEQ14534 574 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ZNF74Q16587 644 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 CYP51A1Q16850 503 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 TRMT5Q32P41 509 aaKnown RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 AGBL2Q5U5Z8 902 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 GKAP1Q5VSY0 366 aaPredicted RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 SLC35D2Q76EJ3 337 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 PXKQ7Z7A4 578 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 DHDDSQ86SQ9 333 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 RANBP3LQ86VV4 465 aaPredicted RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 CCDC36Q8IYA8 594 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 PRR18Q8N4B5 295 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 SCAIQ8N9R8 606 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 IL17RDQ8NFM7 739 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 OR5J2Q8NH18 312 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 OR6S1Q8NH40 331 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 CLDND2Q8NHS1 167 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 GTF3AQ92664 365 aaKnown RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 TFAP2CQ92754 450 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 DVL3Q92997 716 aaPredicted RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 TAMM41Q96BW9 452 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 LRR1Q96L50 414 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ZNF607Q96SK3 696 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 EPYCQ99645 322 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 TMEM43Q9BTV4 400 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ZNF385DQ9H6B1 395 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 MOV10Q9HCE1 1003 aaKnown RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 B3GAT2Q9NPZ5 323 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 TREM2Q9NZC2 230 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 GLTPQ9NZD2 209 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ZMAT5Q9UDW3 170 aaKnown RBP5.32□□□□□ -1.56
NUP88-212ENST00000576708 SLC23A1Q9UHI7 598 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 SLC7A7Q9UM01 511 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 ANGPT4Q9Y264 503 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 GMEB1Q9Y692 573 aa5.32□□□□□ -1.56
NUP88-212ENST00000576708 A0A1W2PPW3 197 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 B5MCH6 92 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 M0R233 179 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 DHHO43323 396 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms