RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FKBP7Q9Y680 259 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 TCRBV3S1A0A5B6 114 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 TMEM129A0AVI4 362 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 SCG5P05408 212 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 ERCC1P07992 297 aaPredicted RBP20.24■□□□□ 0.83
SNF8-217ENST00000576353 HIST1H1CP16403 213 aaKnown RBP20.24■□□□□ 0.83
SNF8-217ENST00000576353 GDI2P50395 445 aaKnown RBP20.24■□□□□ 0.83
SNF8-217ENST00000576353 UCP2P55851 309 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 CLEC12AQ5QGZ9 265 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 LEG1Q6P5S2 330 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 CLEC2AQ6UVW9 174 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 UGT2A3Q6UWM9 527 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 UNQ6126/PRO20091Q6UXV3 157 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 NMNAT3Q96T66 252 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 BCL2L14Q9BZR8 327 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 RAB1BQ9H0U4 201 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 WNT5BQ9H1J7 359 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 MMADHCQ9H3L0 296 aaPredicted RBP20.24■□□□□ 0.83
SNF8-217ENST00000576353 DYNLRB1Q9NP97 96 aa20.24■□□□□ 0.83
SNF8-217ENST00000576353 EIF3KQ9UBQ5 218 aaKnown RBP20.24■□□□□ 0.83
SNF8-217ENST00000576353 SMAD7O15105 426 aaKnown RBP20.23■□□□□ 0.83
SNF8-217ENST00000576353 FAM157BP0CG42 384 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 CCNOP22674 350 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 SELENOVP59797 346 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 LSM6P62312 80 aaKnown RBP20.23■□□□□ 0.83
SNF8-217ENST00000576353 SCRN3Q0VDG4 424 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 RGS7BPQ6MZT1 257 aaPredicted RBP20.23■□□□□ 0.83
SNF8-217ENST00000576353 OR10G2Q8NGC3 310 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 GIPC3Q8TF64 312 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 POM121L2Q96KW2 1035 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 FOXN4Q96NZ1 517 aa20.23■□□□□ 0.83
SNF8-217ENST00000576353 MRPL37Q9BZE1 423 aaKnown RBP20.23■□□□□ 0.83
SNF8-217ENST00000576353 MTORP42345 2549 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 C5orf49A4QMS7 147 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 ARRDC5A6NEK1 342 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 CSF3P09919 207 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 CENPAP49450 140 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 COX10Q12887 443 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 AQP6Q13520 282 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 KCNMB1Q16558 191 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 SLC35F1Q5T1Q4 408 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 ZNF774Q6NX45 483 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 CD300LDQ6UXZ3 194 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 PAPD5Q8NDF8 572 aaKnown RBP20.22■□□□□ 0.83
SNF8-217ENST00000576353 OR52E2Q8NGJ4 325 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 C11orf40Q8WZ69 217 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 TSSK2Q96PF2 358 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 SORCS2Q96PQ0 1159 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 REG4Q9BYZ8 158 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 GSX1Q9H4S2 264 aaPredicted RBP20.22■□□□□ 0.83
SNF8-217ENST00000576353 SRA1Q9HD15 236 aaKnown RBP20.22■□□□□ 0.83
SNF8-217ENST00000576353 TBC1D23Q9NUY8 699 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 NDRG4Q9ULP0 352 aaKnown RBP20.22■□□□□ 0.83
SNF8-217ENST00000576353 B9D1Q9UPM9 204 aa20.22■□□□□ 0.83
SNF8-217ENST00000576353 VPS13CQ709C8 3753 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 LOC100509620A0A075B734 347 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 BHLHE40O14503 412 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 SYNGR3O43761 229 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 FKBP6O75344 327 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 LCKP06239 509 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 MSMPQ1L6U9 139 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 C1orf174Q8IYL3 243 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 OR6V1Q8N148 313 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 OR10H5Q8NGA6 315 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 NEU4Q8WWR8 484 aaPredicted RBP20.21■□□□□ 0.83
SNF8-217ENST00000576353 SYT3Q9BQG1 590 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 TSSK6Q9BXA6 273 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 PLA2G12AQ9BZM1 189 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 RACGAP1Q9H0H5 632 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 OR51B6Q9H340 312 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 MS4A5Q9H3V2 200 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 RPRD1BQ9NQG5 326 aaKnown RBP20.21■□□□□ 0.83
SNF8-217ENST00000576353 DUSP13Q9UII6 198 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 BAIAP2Q9UQB8 552 aa20.21■□□□□ 0.83
SNF8-217ENST00000576353 IGLV1-36A0A0B4J1U3 117 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 RNF223E7ERA6 249 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 M0R233 179 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 DCTN6O00399 190 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 SGCEO43556 437 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 E2F6O75461 281 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 MPZL1O95297 269 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 ADRA2AP08913 450 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 COX5BP10606 129 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 CBX1P83916 185 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 GLO1Q04760 184 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNF8-217ENST00000576353 ARL9Q6T311 187 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 CLEC9AQ6UXN8 241 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 ZNF525Q8N782 197 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 SDR9C7Q8NEX9 313 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 FAM168AQ92567 244 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 FEVQ99581 238 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 SMR3AQ99954 134 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 MYOZ1Q9NP98 299 aaPredicted RBP20.2■□□□□ 0.82
SNF8-217ENST00000576353 DNAJB9Q9UBS3 223 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 REV1Q9UBZ9 1251 aa20.2■□□□□ 0.82
SNF8-217ENST00000576353 ZNF469Q96JG9 3925 aaPredicted RBP20.19■□□□□ 0.82
SNF8-217ENST00000576353 OR6C68A6NDL8 312 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 ZNF250P15622 560 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 ZBTB46Q86UZ6 589 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms