RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NDUFAF1Q9Y375 327 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 NUP153P49790 1475 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 MSH6P52701 1360 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 COL22A1Q8NFW1 1626 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 SMIM28A0A1B0GU29 152 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 MYOCOSA0A1B0GUC4 107 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 RPS10-NUDT3A0A1W2PQS6 291 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 hDV102S1A0JD36 115 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 OR5H15A6NDH6 313 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF233A6NK53 670 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 USP27XA6NNY8 438 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 LYRM9A8MSI8 78 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CCL21O00585 134 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ADAM10O14672 748 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 LAMTOR5O43504 91 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 SYNGR1O43759 233 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 RAD1O60671 282 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CTSVO60911 334 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 OR2B3O76000 313 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 JTBO76095 146 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 LYPD3O95274 346 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 NUDT3O95989 172 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 MT-ND4P03905 459 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 FGF1P05230 155 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CRHP06850 196 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 HOXB7P09629 217 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ACSM4P0C7M7 580 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF12P17014 697 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 TBPP20226 339 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 F8A1P23610 371 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 FGF8P55075 233 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CLDN12P56749 244 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 STXBP1P61764 594 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 BTG1P62324 171 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CD164Q04900 197 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ST3GAL4Q11206 333 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 SRSF9Q13242 221 aaKnown RBP eCLIP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 PRPSAP1Q14558 356 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CALCRLQ16602 461 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 FAM153CQ494X1 144 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 FFAR4Q5NUL3 377 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM42Q69YG0 159 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF585AQ6P3V2 769 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 NPSR1Q6W5P4 371 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF771Q7L3S4 317 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 GDPD3Q7L5L3 318 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 PIWIL4Q7Z3Z4 852 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CEACAM19Q7Z692 300 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 DHFR2Q86XF0 187 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 NRMQ8IXM6 262 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 METTL13Q8N6R0 699 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 WDR31Q8NA23 367 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 SLC37A3Q8NCC5 494 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 OR10W1Q8NGF6 305 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 OR6K3Q8NGY3 331 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 RNASE11Q8TAA1 199 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF502Q8TBZ5 544 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 TCTEX1D2Q8WW35 142 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 NDRG1Q92597 394 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 MYEOVQ96EZ4 313 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ADTRPQ96IZ2 230 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 HSFY1Q96LI6 401 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 OXGR1Q96P68 337 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 BBC3Q96PG8 261 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF385AQ96PM9 386 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 SORCS2Q96PQ0 1159 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 TSC22D3Q99576 134 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 GPR22Q99680 433 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 FOXC2Q99958 501 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 AIF1LQ9BQI0 150 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 HCAR1Q9BXC0 346 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CDCA4Q9BXL8 241 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 NAT10Q9H0A0 1025 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 BOLA2Q9H3K6 86 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 TPK1Q9H3S4 243 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 RBKSQ9H477 322 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM38AQ9H6F2 299 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 CWH43Q9H720 699 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 PARD6AQ9NPB6 346 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 WRAP73Q9P2S5 460 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 IL36RNQ9UBH0 155 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF107Q9UII5 783 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 BTNL2Q9UIR0 455 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 SAMD4AQ9UPU9 718 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 RPL36Q9Y3U8 105 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 PTPRGP23470 1445 aa4.28□□□□□ -1.72
TOPBP1-210ENST00000572787 MROH7Q68CQ1 1323 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF816-ZNF321PA0A0X1KG74 233 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 K7ERI5 159 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 CDIPTO14735 213 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 PRKNO60260 465 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ENTPD6O75354 484 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 BCAR3O75815 825 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 GAGE7O76087 117 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 GCGP01275 180 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 PPBPP02775 128 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 GAGE12FP0CL80 117 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 GAGE12GP0CL81 117 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms