RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 VNN3Q9NY84 501 aa6.74□□□□□ -1.33
SMG6-211ENST00000572369 ZNF224Q9NZL3 707 aa6.74□□□□□ -1.33
SMG6-211ENST00000572369 PDP1Q9P0J1 537 aaPredicted RBP6.74□□□□□ -1.33
SMG6-211ENST00000572369 KIF17Q9P2E2 1029 aa6.74□□□□□ -1.33
SMG6-211ENST00000572369 EIF3KQ9UBQ5 218 aaKnown RBP6.74□□□□□ -1.33
SMG6-211ENST00000572369 DNAJB9Q9UBS3 223 aa6.74□□□□□ -1.33
SMG6-211ENST00000572369 COA3Q9Y2R0 106 aaPredicted RBP6.74□□□□□ -1.33
SMG6-211ENST00000572369 CDH10Q9Y6N8 788 aa6.74□□□□□ -1.33
SMG6-211ENST00000572369 AKAP6Q13023 2319 aa6.74□□□□□ -1.33
SMG6-211ENST00000572369 ARPC3O15145 178 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 DEAF1O75398 565 aaPredicted RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 CRLF1O75462 422 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 TXNDC12O95881 172 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 CD8AP01732 235 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 HLA-DQA2P01906 255 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 LCKP06239 509 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 CST2P09228 141 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 OR4A8P0C604 315 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 FAM157BP0CG42 384 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 CCL2P13500 99 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 HIST1H1CP16403 213 aaKnown RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 CTLA4P16410 223 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 POU1F1P28069 291 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 THBS4P35443 961 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 CDKN2AP42771 156 aaKnown RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 GDI2P50395 445 aaKnown RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 NUDT6P53370 316 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 SELENOVP59797 346 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMG6-211ENST00000572369 COX10Q12887 443 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 PABPC1L2AQ5JQF8 200 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 FAM27BQ5VT28 67 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 PTCHD4Q6ZW05 846 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 DTX2Q86UW9 622 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 GLB1L2Q8IW92 636 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 ATG16L2Q8NAA4 619 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 AKR7LQ8NHP1 331 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 NABP1Q96AH0 204 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 OTULINQ96BN8 352 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 NMD3Q96D46 503 aaKnown RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 Q96MF0 132 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 NMNAT3Q96T66 252 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 FEVQ99581 238 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 VRK1Q99986 396 aaPredicted RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 ZNF416Q9BWM5 594 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 GSX2Q9BZM3 304 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 NUAK2Q9H093 628 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 FN3KQ9H479 309 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 PLK3Q9H4B4 646 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 BARX1Q9HBU1 254 aaPredicted RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 EMC7Q9NPA0 242 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 POLE4Q9NR33 117 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 VSX1Q9NZR4 365 aaPredicted RBP6.73□□□□□ -1.33
SMG6-211ENST00000572369 KLHL21Q9UJP4 597 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 CMAHPQ9Y471 501 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 UGT2A1Q9Y4X1 527 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 AP4S1Q9Y587 144 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 TIMM10BQ9Y5J6 103 aa6.73□□□□□ -1.33
SMG6-211ENST00000572369 CADP27708 2225 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 C5orf49A4QMS7 147 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 RIIAD1A6NNX1 92 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 B9A039 149 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 SSX4O60224 188 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 IFNGP01579 166 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 ERCC1P07992 297 aaPredicted RBP6.72□□□□□ -1.33
SMG6-211ENST00000572369 MMP7P09237 267 aaPredicted RBP6.72□□□□□ -1.33
SMG6-211ENST00000572369 ZNF35P13682 527 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 ANXA8P13928 327 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 PRKACGP22612 351 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 NR4A1P22736 598 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 FASP25445 335 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 STOMP27105 288 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 RAD52P43351 418 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 PSG4Q00888 419 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 HGFACQ04756 655 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 GLO1Q04760 184 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 SCRN3Q0VDG4 424 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 ADIPOQQ15848 244 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 SLC36A3Q495N2 470 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 ZNF770Q6IQ21 691 aaPredicted RBP6.72□□□□□ -1.33
SMG6-211ENST00000572369 RGS7BPQ6MZT1 257 aaPredicted RBP6.72□□□□□ -1.33
SMG6-211ENST00000572369 ARL9Q6T311 187 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 UNQ6126/PRO20091Q6UXV3 157 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 TMEM179BQ7Z7N9 219 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 ZNF584Q8IVC4 421 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 CYB561A3Q8NBI2 242 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 PROKR2Q8NFJ6 384 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 OR2T33Q8NG76 320 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 OR2AJ1Q8NGZ0 328 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 ZNF75AQ96N20 296 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 TSSK2Q96PF2 358 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 SNX18Q96RF0 628 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 NIPSNAP1Q9BPW8 284 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 WACQ9BTA9 647 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 BDH2Q9BUT1 245 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 CDADC1Q9BWV3 514 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 TEX12Q9BXU0 123 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 DGCR6LQ9BY27 220 aa6.72□□□□□ -1.33
SMG6-211ENST00000572369 PLA2G12AQ9BZM1 189 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms