RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 SLC40A1Q9NP59 571 aa3.04□□□□□ -1.92
CDC27-213ENST00000571643 MRPL40Q9NQ50 206 aaKnown RBP3.04□□□□□ -1.92
CDC27-213ENST00000571643 GSN-AS1Q9NRJ2 163 aa3.04□□□□□ -1.92
CDC27-213ENST00000571643 RCC2Q9P258 522 aaKnown RBP3.04□□□□□ -1.92
CDC27-213ENST00000571643 IKZF2Q9UKS7 526 aa3.04□□□□□ -1.92
CDC27-213ENST00000571643 ATG4BQ9Y4P1 393 aa3.04□□□□□ -1.92
CDC27-213ENST00000571643 U3KQA8 63 aa3.04□□□□□ -1.92
CDC27-213ENST00000571643 UNC13CQ8NB66 2214 aa3.04□□□□□ -1.92
CDC27-213ENST00000571643 PIKFYVEQ9Y2I7 2098 aa3.04□□□□□ -1.92
CDC27-213ENST00000571643 PLXNB3Q9ULL4 1909 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 ASXL3Q9C0F0 2248 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 MN1Q10571 1320 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 RP1P56715 2156 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 IGHV1OR21-1A0A087WYE8 117 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TMEM213A2RRL7 107 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TRABD2BA6NFA1 517 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 D6RAR5 112 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 PRSS46E5RG02 174 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 E5RI56 91 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 F8VVB4 439 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 F8VWA3 439 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 RNASEK-C17orf49H0YIS7 233 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 BTN3A3O00478 584 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 PRMT5O14744 637 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 RAB29O14966 203 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 IDH3BO43837 385 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 ATP6AP2O75787 350 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 EML2O95834 649 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 FADS2O95864 444 aaKnown RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 SLC35G4P0C7Q5 338 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 PIRTP0C851 137 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 ZNF26P17031 533 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 CNR1P21554 472 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 IVDP26440 423 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 STOMP27105 288 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 LAP3P28838 519 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 CD1CP29017 333 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 RBMS1P29558 406 aaKnown RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 FOXN2P32314 431 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 SHMT2P34897 504 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 UQCRFS1P47985 274 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 NPBWR2P48146 333 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TGM4P49221 684 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 LIMK2P53671 638 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 REEP5Q00765 189 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 IL9RQ01113 521 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 SEMG2Q02383 582 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 IRF8Q02556 426 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 RELAQ04206 551 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 C1orf61Q13536 156 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 POU6F1Q14863 301 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TMED2Q15363 201 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 WHAMMP3Q1A5X7 153 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 SLC5A12Q1EHB4 618 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TTLL9Q3SXZ7 439 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 GLYR1Q49A26 553 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 XKR6Q5GH73 641 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 HES3Q5TGS1 186 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TIGD3Q6B0B8 471 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 NEPROQ6NW34 567 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 GUSBP11Q6P575 273 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 RFLNAQ6ZTI6 216 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TMPRSS11FQ6ZWK6 438 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 UTS2BQ765I0 119 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 H2BFWTQ7Z2G1 175 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 MRPL21Q7Z2W9 205 aaKnown RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 ISCA2Q86U28 154 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 SERPINA9Q86WD7 417 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TRAPPC5Q8IUR0 188 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 ZNF547Q8IVP9 402 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 IQCKQ8N0W5 287 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TMEM123Q8N131 208 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 PDIK1LQ8N165 341 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 RAB42Q8N4Z0 105 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 FBXO36Q8NEA4 188 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 OR2T12Q8NG77 320 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 OR5AU1Q8NGC0 362 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 OR13J1Q8NGT2 312 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 SLC37A2Q8TED4 501 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 FGF11Q92914 225 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 RAD51AP1Q96B01 352 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 CXorf40BQ96DE9 158 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 AKR1E2Q96JD6 320 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 C9orf72Q96LT7 481 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 ZNF582Q96NG8 517 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 SLC30A2Q9BRI3 323 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 C7orf50Q9BRJ6 194 aaKnown RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 LMF2Q9BU23 707 aaKnown RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 NDUFAF3Q9BU61 184 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 DDA1Q9BW61 102 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TCEAL2Q9H3H9 227 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 KIR3DX1Q9H7L2 352 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 C10orf88Q9H8K7 445 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 TRIM45Q9H8W5 580 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 LPAR2Q9HBW0 351 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 FBXO8Q9NRD0 319 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 ZNF701Q9NV72 531 aaPredicted RBP3.03□□□□□ -1.92
CDC27-213ENST00000571643 TAS2R7Q9NYW3 318 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 CD274Q9NZQ7 290 aa3.03□□□□□ -1.92
CDC27-213ENST00000571643 SLC17A7Q9P2U7 560 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms