RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 C4orf45Q96LM5 186 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 MAGEB18Q96M61 343 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 RBP7Q96R05 134 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 JMJD8Q96S16 334 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 TMEM120AQ9BXJ8 343 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 EGLN1Q9GZT9 426 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 SMURF2Q9HAU4 748 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 DDX28Q9NUL7 540 aaKnown RBP7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 GMPR2Q9P2T1 348 aaKnown RBP7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 STX18Q9P2W9 335 aaKnown RBP7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 EGFL7Q9UHF1 273 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 PCDHGB1Q9Y5G3 927 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 TIMM10BQ9Y5J6 103 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 SNX13Q9Y5W8 968 aa7.28□□□□□ -1.24
CTDNEP1-203ENST00000570385 IGHV3OR16-10A0A075B7F0 116 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 IGHV3-64DA0A0J9YX35 117 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 LOC100653049A0A140TA62 436 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 CENPBD1B2RD01 187 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 TRAPPC2LH3BP13 241 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 J3KTA2 159 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 J3QLI3 93 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 MRASO14807 208 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 KCNAB3O43448 404 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 EDF1O60869 148 aaKnown RBP7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 KRT34O76011 436 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF205O95201 554 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 ABHD16AO95870 558 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 CST2P09228 141 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 TSPAN19P0C672 248 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 FPR2P25090 351 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 GUCA1AP43080 201 aaPredicted RBP7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 ERFP50548 548 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 UBA52P62987 128 aaKnown RBP7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 PSG7Q13046 419 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 ENDOGQ14249 297 aaKnown RBP7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 MTX3Q5HYI7 312 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 C1orf94Q6P1W5 598 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 JAZF1Q86VZ6 243 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 TREML1Q86YW5 311 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 NRMQ8IXM6 262 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 TEX29Q8N6K0 151 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 LRRC75AQ8NAA5 344 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR2Z1Q8NG97 314 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR8J3Q8NGG0 315 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR13C2Q8NGS9 318 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 LIPHQ8WWY8 451 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 SLC7A6Q92536 515 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 BPIFA2Q96DR5 249 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF583Q96ND8 569 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 SH3GL1Q99961 368 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 ALG12Q9BV10 488 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 RERGLQ9H628 205 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 CYSLTR2Q9NS75 346 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF69Q9UC07 566 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 KLHL21Q9UJP4 597 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 A4GNTQ9UNA3 340 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 HIF3AQ9Y2N7 669 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 NPTNQ9Y639 398 aa7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 SOX21Q9Y651 276 aaPredicted RBP7.27□□□□□ -1.25
CTDNEP1-203ENST00000570385 EFCAB9A8MZ26 197 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 FOXH1O75593 365 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 FSHBP01225 129 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 IFNA14P01570 189 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 IGHV2-70P01814 119 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 MSR1P21757 451 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 KDELR2P33947 212 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 RPL4P36578 427 aaKnown RBP7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 GPR4P46093 362 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 HTR5AP47898 357 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 LIMS1P48059 325 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ARHGDIAP52565 204 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 PCBD1P61457 104 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 SLC3A1Q07837 685 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ST3GAL3Q11203 375 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 KLF10Q13118 480 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ARMCX4Q5H9R4 360 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ERICH5Q6P6B1 374 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 TBPL2Q6SJ96 375 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 UNQ6126/PRO20091Q6UXV3 157 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 RBMS3Q6XE24 437 aaKnown RBP7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 Q6ZR03 302 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 VTCN1Q7Z7D3 282 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 OAFQ86UD1 273 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR5AS1Q8N127 324 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 DEFB108BQ8NET1 73 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 SGMS2Q8NHU3 365 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ITLN1Q8WWA0 313 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 DVL3Q92997 716 aaPredicted RBP7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 CMBLQ96DG6 245 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZMYND19Q96E35 227 aaPredicted RBP7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 PRRC1Q96M27 445 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 Q96M85 177 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ELOVL3Q9HB03 270 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 POLE4Q9NR33 117 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 TMEM106BQ9NUM4 274 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 PURGQ9UJV8 347 aaKnown RBP7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZDHHC8Q9ULC8 765 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 STARD10Q9Y365 291 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 ADAM18Q9Y3Q7 739 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms