RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 EIF4E2O60573 245 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TSPAN2O60636 221 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TNFAIP8O95379 198 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 HPP00738 406 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TCN2P20062 427 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 ELAVL4P26378 380 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 RBMS1P29558 406 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 ETV5P41161 510 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 RBM34P42696 430 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 MAGEB1P43366 347 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 UGT2B15P54855 530 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 COPZ1P61923 177 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 ESRRGP62508 458 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 KEAP1Q14145 624 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 EXOC3L2Q2M3D2 409 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 FGD3Q5JSP0 725 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 PDZK1Q5T2W1 519 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 FAM69BQ5VUD6 431 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 SLC18B1Q6NT16 456 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 BTNL8Q6UX41 500 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 SHISA6Q6ZSJ9 500 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 PLEKHM3Q6ZWE6 761 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 NDUFAF7Q7L592 441 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TSEN54Q7Z6J9 526 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 VRK2Q86Y07 508 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 RNF113BQ8IZP6 322 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 SLC43A2Q8N370 569 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 GBGT1Q8N5D6 347 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 FAM71CQ8NEG0 241 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 ELP5Q8TE02 316 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TMEM255BQ8WV15 326 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 DNAJA4Q8WW22 397 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 ACOT11Q8WXI4 607 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 KIAA1143Q96AT1 154 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 PHF21AQ96BD5 680 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 OMA1Q96E52 524 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 DTNBP1Q96EV8 351 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 SECISBP2Q96T21 854 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 MCHR1Q99705 422 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 SLC29A1Q99808 456 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 APOL4Q9BPW4 351 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 DGCR6LQ9BY27 220 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 GABARAPL3Q9BY60 117 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 DEFB126Q9BYW3 111 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TBL1XR1Q9BZK7 514 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 PRSS22Q9GZN4 317 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 NXF5Q9H1B4 397 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 C12orf10Q9HB07 376 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TMEM27Q9HBJ8 222 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 GPN1Q9HCN4 374 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 ACER3Q9NUN7 267 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 C1RLQ9NZP8 487 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 KLHL9Q9P2J3 617 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 B3GAT1Q9P2W7 334 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 FOXA2Q9Y261 457 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 FARSAQ9Y285 508 aaKnown RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 U3KQV3 271 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 DMDP11532 3685 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 A0A0B4J203 849 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 TRBV11-1A0A0K0K1C0 115 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 SH3PXD2BA1X283 911 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 TP53I11O14683 189 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 ZNF264O43296 627 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 SPRY3O43610 288 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 CHP2O43745 196 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 RAD1O60671 282 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 REM1O75628 298 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 SERPINI2O75830 405 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 TNFSF15O95150 251 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 UTS2O95399 124 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 EPPINO95925 133 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 CSTAP01040 98 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 TGFAP01135 160 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 IGF2P01344 180 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 IGKV1D-16P01601 117 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 LCATP04180 440 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 UMODP07911 640 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 SMIM18P0DKX4 95 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 PNMTP11086 282 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 COX6A1P12074 109 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 TNFRSF1BP20333 461 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 CBLP22681 906 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 RFX3P48380 749 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 AMTP48728 403 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 NR0B1P51843 470 aaKnown RBP6.25□□□□□ -1.41
CNOT1-222ENST00000570139 ZNF136P52737 540 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 SMSP52788 366 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 EFNA3P52797 238 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 CLDN15P56746 228 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 NUP107P57740 925 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 ADARB1P78563 741 aaKnown RBP6.25□□□□□ -1.41
CNOT1-222ENST00000570139 PPP1R8Q12972 351 aaKnown RBP6.25□□□□□ -1.41
CNOT1-222ENST00000570139 SNTA1Q13424 505 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 GANABQ14697 944 aaKnown RBP6.25□□□□□ -1.41
CNOT1-222ENST00000570139 PDK3Q15120 406 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 MAPK14Q16539 360 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 ACKR1Q16570 336 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 RPL13AP3Q6NVV1 102 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 ULK3Q6PHR2 472 aa6.25□□□□□ -1.41
CNOT1-222ENST00000570139 OPN5Q6U736 354 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms