RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 G6PC2Q9NQR9 355 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 NKIRAS2Q9NYR9 191 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 EGFL7Q9UHF1 273 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 SAMD4AQ9UPU9 718 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 A0A087WUU8 490 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 IQCMA0A1B0GVH7 501 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 SLC22A23A1A5C7 686 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 C5orf49A4QMS7 147 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 IMPA2O14732 288 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 HSD17B1P14061 328 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 CCNOP22674 350 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 SRP14P37108 136 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 CRYBB2P43320 205 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 CTXN1P60606 82 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 HSF2Q03933 536 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 PRKCDQ05655 676 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 TSTQ16762 297 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 USP51Q70EK9 711 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 GLCCI1Q86VQ1 547 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 CYP4Z1Q86W10 505 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 RFLNBQ8N5W9 214 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 SLC25A40Q8TBP6 338 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 FNDC11Q9BVV2 318 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 BCL2L14Q9BZR8 327 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 OR2J1Q9GZK6 312 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 METTL17Q9H7H0 456 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 EMC7Q9NPA0 242 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 MAGEL2Q9UJ55 1249 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 ADAM18Q9Y3Q7 739 aa11.76□□□□□ -0.53
GTF3C1-211ENST00000569653 IGHV1-69-2A0A0G2JMI3 117 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 HTR3EA5X5Y0 456 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 TCF21O43680 179 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 ICMTO60725 284 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 ENTPD5O75356 428 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 TFP02787 698 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 APLNRP35414 380 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 RAD52P43351 418 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 GPR4P46093 362 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 PLP2Q04941 152 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 TRAM2Q15035 370 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 SPATS1Q496A3 300 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 GLYATQ6IB77 296 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 TMEM154Q6P9G4 183 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 TRPM8Q7Z2W7 1104 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 HDDC2Q7Z4H3 204 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 RNF148Q8N7C7 305 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 OR1J2Q8NGS2 313 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 KLF14Q8TD94 323 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 NSL1Q96IY1 281 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 ZNF665Q9H7R5 613 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 GORASP2Q9H8Y8 452 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 CCNB1IP1Q9NPC3 277 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 SLCO1C1Q9NYB5 712 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
GTF3C1-211ENST00000569653 SPRY3O43610 288 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 PLPP2O43688 288 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 RGS9O75916 674 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 IGHV2-5P01817 119 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 CST2P09228 141 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 FXYD6P3P58550 94 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 PCGF3Q3KNV8 242 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 MESTQ5EB52 335 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 MBNL2Q5VZF2 373 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 THSD4Q6ZMP0 1018 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 ZNF771Q7L3S4 317 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 FAM122BQ7Z309 247 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 DEFB107AQ8IZN7 70 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 FAM156AQ8NDB6 213 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 ABHD4Q8TB40 342 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 Q96M85 177 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 CDRT15Q96T59 188 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 POLE4Q9NR33 117 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 DCAF13Q9NV06 445 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 KLHL21Q9UJP4 597 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 ENPP4Q9Y6X5 453 aa11.74□□□□□ -0.53
GTF3C1-211ENST00000569653 LOC105371242A0A075B767 164 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 A0A1W2PPL8 197 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 EFCAB9A8MZ26 197 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 UBOX5O94941 541 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 PTHP01270 115 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 CTLA4P16410 223 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 CALB2P22676 271 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 GDI2P50395 445 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 ERFP50548 548 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 ZNF81P51508 661 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 PPP1CBP62140 327 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 TAF11Q15544 211 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 Q6ZR03 302 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 FAM86B1Q8N7N1 296 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 OR51F2Q8NH61 342 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 SNX33Q8WV41 574 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 ACOT11Q8WXI4 607 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 SLC7A6Q92536 515 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 RASD2Q96D21 266 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 TMPRSS13Q9BYE2 586 aa11.73□□□□□ -0.53
GTF3C1-211ENST00000569653 LRMDAQ9H2I8 198 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms