RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 GPR160Q9UJ42 338 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 PADI3Q9ULW8 664 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FZD6O60353 706 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 TXNDC12O95881 172 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SULT1A1P50225 295 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FXYD4P59646 89 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FPGSQ05932 587 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 GPNMBQ14956 572 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 KHDC3LQ587J8 217 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 DOK3Q7L591 496 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FA2HQ7L5A8 372 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 OR8G5Q8NG78 346 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SCAMP5Q8TAC9 235 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SELENOIQ9C0D9 397 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 GAL3ST2Q9H3Q3 398 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 GOLGA2P5Q9HBQ8 144 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF160Q9HCG1 818 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 UQCR10Q9UDW1 63 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 CD84Q9UIB8 345 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 RHBDD3Q9Y3P4 386 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 MYH15Q9Y2K3 1946 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 WDR1O75083 606 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF93P35789 620 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 LIMK1P53667 647 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 PLCXD2Q0VAA5 305 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FFAR4Q5NUL3 377 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 PIP5KL1Q5T9C9 394 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 TFAP2EQ6VUC0 442 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM182Q6ZP80 229 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 CYB561A3Q8NBI2 242 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 DYRK2Q92630 601 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 RPUSD4Q96CM3 377 aaKnown RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SPATA6Q9NWH7 488 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 NME2P1O60361 137 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 PCCBP05166 539 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 CD82P27701 267 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 DLX2Q07687 328 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 GRM7Q14831 915 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 PDGFRLQ15198 375 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 C8orf82Q6P1X6 216 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SLC35E3Q7Z769 313 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 DPF1Q92782 380 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 LHX6Q9UPM6 363 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 A0A0U1RQK1 487 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 A0A1B0GTQ1 180 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF320A2RRD8 509 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CT45A6P0DMU7 189 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CT45A5P0DMU8 189 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CT45A7P0DMV0 189 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 TNFRSF1BP20333 461 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CT45A1Q5HYN5 189 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 PRAMEF19Q5SWL8 479 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 STUMQ69YW2 141 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 OR2A2Q6IF42 318 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CATSPERDQ86XM0 798 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 FAM24BQ8N5W8 94 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CT45A3Q8NHU0 189 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 LMX1AQ8TE12 382 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 FBLIM1Q8WUP2 373 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 ARSGQ96EG1 525 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF845Q96IR2 970 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-216ENST00000569240 MFRPQ9BY79 579 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 GHITMQ9H3K2 345 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 HAO2Q9NYQ3 351 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 A0A1B0GTW7 788 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 SFT2D2O95562 160 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 HIST1H1TP22492 207 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-216ENST00000569240 GCSHP23434 173 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 PSMB10P40306 273 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 RTP2Q5QGT7 225 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 RPL7L1Q6DKI1 246 aaKnown RBP6.52□□□□□ -1.37
CNOT1-216ENST00000569240 Q6ZPB1 254 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-216ENST00000569240 NRIP2Q9BQI9 281 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 KLRF1Q9NZS2 232 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CDC42EP3Q9UKI2 254 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 PLSCR1O15162 318 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 MTX2O75431 263 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 IGHG1P01857 330 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 TBXA2RP21731 343 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 P2RY1P47900 373 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 FASLGP48023 281 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 FAM189BP81408 668 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 FAM3AP98173 230 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 IL24Q13007 206 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 CRMP1Q14194 572 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 HIST3H3Q16695 136 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 MIDNQ504T8 468 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 KIAA1456Q9P272 454 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 LRP6O75581 1613 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 FAM183AA6NL82 134 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 ZFP92A6NM28 416 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 HEXAP06865 529 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 LINC00614P0C842 121 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 EPHA1P21709 976 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 SLC6A11P48066 632 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 RPS26P62854 115 aaKnown RBP6.52□□□□□ -1.37
CNOT1-216ENST00000569240 SDHAF4Q5VUM1 108 aa6.52□□□□□ -1.37
CNOT1-216ENST00000569240 LIPIQ6XZB0 460 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms