RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 KRT71Q3SY84 523 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 ZNF774Q6NX45 483 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 ARL9Q6T311 187 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 C1QL4Q86Z23 238 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 ALDH16A1Q8IZ83 802 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 SMYD1Q8NB12 490 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 OR2Z1Q8NG97 314 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 OR10S1Q8NGN2 331 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 ADAMTS16Q8TE57 1224 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 ASB10Q8WXI3 467 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 NABP1Q96AH0 204 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 PAIP2Q9BPZ3 127 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 SLC30A2Q9BRI3 323 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 MARCH7Q9H992 704 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 NOX4Q9NPH5 578 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 THAP1Q9NVV9 213 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 IL19Q9UHD0 177 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 UGT2A1Q9Y4X1 527 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 GMNCA6NCL1 334 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 CPSF4LA6NMK7 179 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 TMEM178BH3BS89 294 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 UBDO15205 165 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 F13BP05160 661 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 VIMP08670 466 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 WNT2P09544 360 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 NR2C1P13056 603 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 RPS2P15880 293 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 SELEP16581 610 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 BPIFB3P59826 476 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 RPL15P61313 204 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 GNB2P62879 340 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 RPL18Q07020 188 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 MPP2Q14168 576 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 SGCAQ16586 387 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 TAF9Q16594 264 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 FBLN7Q53RD9 439 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 ENTPD8Q5MY95 495 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 LRIF1Q5T3J3 769 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 ASPHD2Q6ICH7 369 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 BRD3OSQ6XYD6 125 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 MSRB3Q8IXL7 192 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 POU5F2Q8N7G0 328 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 OR6T1Q8NGN1 323 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 VANGL1Q8TAA9 524 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 ITLN1Q8WWA0 313 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 RAB40AQ8WXH6 277 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 DACT3Q96B18 629 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 PLEKHA8Q96JA3 519 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 MPP4Q96JB8 637 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 C4orf45Q96LM5 186 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 OR2V2Q96R30 315 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 ZNF426Q9BUY5 554 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 CHIAQ9BZP6 476 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 OR2H1Q9GZK4 316 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 MAN2C1Q9NTJ4 1040 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 CORO2BQ9UQ03 480 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 ANGPT4Q9Y264 503 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 GMEB1Q9Y692 573 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 TANC2Q9HCD6 1990 aa9.88□□□□□ -0.83
GTF3C1-209ENST00000568569 TRAPPC13A5PLN9 417 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 SLC22A31A6NKX4 558 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 IFNL4K9M1U5 179 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 SNNO75324 88 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 ALX3O95076 343 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 LYPD3O95274 346 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 ABHD16AO95870 558 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 THY1P04216 161 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 MMP16P51512 607 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 UGT2B15P54855 530 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 PCBD1P61457 104 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 VSNL1P62760 191 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 CD47Q08722 323 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 HLXQ14774 488 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 NPTX1Q15818 432 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 DUSP7Q16829 419 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 GPR157Q5UAW9 335 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 FAM27BQ5VT28 67 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 Q6YL49 198 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 KLBQ86Z14 1044 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 NPEPL1Q8NDH3 523 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 NSMAFQ92636 917 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 NMD3Q96D46 503 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 OR52B2Q96RD2 323 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 WNT5BQ9H1J7 359 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 KCNK9Q9NPC2 374 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 INIPQ9NRY2 104 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 VAPAQ9P0L0 249 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 SLAMF8Q9P0V8 285 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 MIOXQ9UGB7 285 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 SLC7A7Q9UM01 511 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 RNF114Q9Y508 228 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 TIMM10BQ9Y5J6 103 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 POMT1Q9Y6A1 747 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 NBEAL2Q6ZNJ1 2754 aa9.87□□□□□ -0.83
GTF3C1-209ENST00000568569 IGKV1D-43A0A0B4J1Z2 117 aa9.86□□□□□ -0.83
GTF3C1-209ENST00000568569 KIR2DS1A0A191URI9 304 aa9.86□□□□□ -0.83
GTF3C1-209ENST00000568569 NPIPB13A6NJU9 1138 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms