RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 KLK11Q9UBX7 282 aa6.89□□□□□ -1.31
ATXN3-250ENST00000568290 C19orf25Q9UFG5 118 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-250ENST00000568290 B3GALT5Q9Y2C3 310 aa6.89□□□□□ -1.31
ATXN3-250ENST00000568290 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
ATXN3-250ENST00000568290 TMED7Q9Y3B3 224 aa6.89□□□□□ -1.31
ATXN3-250ENST00000568290 COL4A2P08572 1712 aa6.89□□□□□ -1.31
ATXN3-250ENST00000568290 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 DNAH12Q6ZR08 3092 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 PRRC2BQ5JSZ5 2229 aaKnown RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 A0A1B0GX78 115 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 TCRBV16S1A1N1A0A5B0 115 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 D6RAR5 112 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 LMO7DNF2Z398 122 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 PYCARD-AS1I3L0S3 204 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 GOSR2O14653 212 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ARPC5O15511 151 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 GMDSO60547 372 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 TSPAN2O60636 221 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 SDC3O75056 442 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 CD8AP01732 235 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 HPXP02790 462 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 CD74P04233 296 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 IGKV3-11P04433 115 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 AMY2AP04746 511 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 IGHV4-34P06331 123 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 FCER2P06734 321 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 OR4E1P0C645 316 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 GIMD1P0DJR0 217 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 MYOGP15173 224 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ZNF20P17024 532 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 RAB3AP20336 220 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 MAOAP21397 527 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 BDKRB2P30411 391 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 GNALP38405 381 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 CX3CR1P49238 355 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 FNTBP49356 437 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ARRB1P49407 418 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 MAZP56270 477 aaKnown RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ACY1Q03154 408 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 HLXQ14774 488 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 UBXN2BQ14CS0 331 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 EBPQ15125 230 aaKnown RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 POU4F3Q15319 338 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 NSDHLQ15738 373 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ACKR1Q16570 336 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 PNLIPRP3Q17RR3 467 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 DEFB110Q30KQ9 67 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 C14orf28Q4W4Y0 310 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 VWA2Q5GFL6 755 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 WDR38Q5JTN6 314 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 RNFT1Q5M7Z0 435 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 THEM4Q5T1C6 240 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 FAM122CQ6P4D5 195 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 OGFOD3Q6PK18 319 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 SLC36A1Q7Z2H8 476 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 PEG10Q86TG7 708 aaKnown RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ZNF546Q86UE3 836 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 DTX3Q8N9I9 347 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 PNLDC1Q8NA58 520 aaKnown RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 CLEC1AQ8NC01 280 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 OR11H4Q8NGC9 324 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 OR5M9Q8NGP3 310 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 OR8K3Q8NH51 312 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 NUBPLQ8TB37 319 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ZNF519Q8TB69 540 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 LMX1AQ8TE12 382 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 PTPMT1Q8WUK0 201 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 SLC25A43Q8WUT9 341 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 TAAR8Q969N4 342 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 ZBTB8AQ96BR9 441 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 SLC25A36Q96CQ1 311 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 GAL3ST4Q96RP7 486 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 SEC22CQ9BRL7 303 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 GPR174Q9BXC1 333 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 TTTY10Q9BZA0 68 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 WWTR1Q9GZV5 400 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 NXF5Q9H1B4 397 aaKnown RBP6.88□□□□□ -1.31
ATXN3-250ENST00000568290 PIGMQ9H3S5 423 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 SYNPO2LQ9H987 977 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 FAM60AQ9NP50 221 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 FANCFQ9NPI8 374 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 STARD5Q9NSY2 213 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 SDHAF2Q9NX18 166 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 OR52A1Q9UKL2 312 aa6.88□□□□□ -1.31
ATXN3-250ENST00000568290 IGKV3D-11A0A0A0MRZ8 115 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 A0A0B4J203 849 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 A0A0B4J2A0 478 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 TMEM269A0A1B0GVZ9 245 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 LOC390937A0A1W2PQ73 354 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 RPS10-NUDT3A0A1W2PQS6 291 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 SLC22A23A1A5C7 686 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 RAB19A4D1S5 217 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 TVP23AA6NH52 213 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 C10orf142B7Z368 130 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 TGFBR3LH3BV60 316 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-250ENST00000568290 PLPP3O14495 311 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 DVL2O14641 736 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 WIPF1O43516 503 aa6.87□□□□□ -1.31
ATXN3-250ENST00000568290 CDC123O75794 336 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms