RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
CLK3-218ENST00000566926 GPR35Q9HC97 309 aa11.74□□□□□ -0.53
CLK3-218ENST00000566926 FAIMQ9NVQ4 179 aa11.74□□□□□ -0.53
CLK3-218ENST00000566926 MRPS18AQ9NVS2 196 aaKnown RBP11.74□□□□□ -0.53
CLK3-218ENST00000566926 FKBP14Q9NWM8 211 aa11.74□□□□□ -0.53
CLK3-218ENST00000566926 NPAP1Q9NZP6 1156 aa11.74□□□□□ -0.53
CLK3-218ENST00000566926 WARS2Q9UGM6 360 aaKnown RBP11.74□□□□□ -0.53
CLK3-218ENST00000566926 IER3IP1Q9Y5U9 82 aa11.74□□□□□ -0.53
CLK3-218ENST00000566926 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
CLK3-218ENST00000566926 A0A1W2PR80 420 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 ZNF99A8MXY4 864 aaPredicted RBP11.73□□□□□ -0.53
CLK3-218ENST00000566926 SERPINI2O75830 405 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 NR2C1P13056 603 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 HLA-DOBP13765 273 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 CD40P25942 277 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 SLC15A1P46059 708 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 MTNR1AP48039 350 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 BLVRAP53004 296 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 SLC25A1P53007 311 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 CDH11P55287 796 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 RPL27P61353 136 aaKnown RBP11.73□□□□□ -0.53
CLK3-218ENST00000566926 ERVK-25P63136 954 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
CLK3-218ENST00000566926 KRR1Q13601 381 aaKnown RBP11.73□□□□□ -0.53
CLK3-218ENST00000566926 CEACAM16Q2WEN9 425 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 SLC35D3Q5M8T2 416 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 LCN1P1Q5VSP4 162 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 RNLSQ5VYX0 342 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 SLC35D2Q76EJ3 337 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 C20orf196Q8IYI0 205 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 PIAS4Q8N2W9 510 aaPredicted RBP11.73□□□□□ -0.53
CLK3-218ENST00000566926 ARIH2OSQ8N7S6 290 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 OR6N1Q8NGY5 312 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 OR6X1Q8NH79 312 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 FNDC8Q8TC99 324 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
CLK3-218ENST00000566926 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
CLK3-218ENST00000566926 EMC6Q9BV81 110 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 CRLF2Q9HC73 371 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 MED29Q9NX70 200 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 HAO2Q9NYQ3 351 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 DNAJC27Q9NZQ0 273 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 POU2F3Q9UKI9 436 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 PCDHGB1Q9Y5G3 927 aa11.73□□□□□ -0.53
CLK3-218ENST00000566926 HIVEP1P15822 2718 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 ARPC4-TTLL3A0A0A6YYG9 625 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 CENPBD1B2RD01 187 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 PTGES3LE9PB15 166 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 M0R129 80 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 XPNPEP2O43895 674 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 FADS2O95864 444 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 BCL10O95999 233 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 RENP00797 406 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 SMIM18P0DKX4 95 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 DBTP11182 482 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 IFNGR1P15260 489 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 HIST1H1CP16403 213 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 TTKP33981 857 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 RPL5P46777 297 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 CSNK1A1P48729 337 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 BIDP55957 195 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 NKX6-1P78426 367 aaPredicted RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 ARF1P84077 181 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 ZNF91Q05481 1191 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLK3-218ENST00000566926 CAMK2DQ13557 499 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 SMN1Q16637 294 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 C3orf36Q3SXR2 165 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 HIKESHIQ53FT3 197 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 SLC35F1Q5T1Q4 408 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 CARD17Q5XLA6 110 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 PLBD1Q6P4A8 553 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 SLC22A25Q6T423 547 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 NHLRC1Q6VVB1 395 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 AHSA2Q719I0 299 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 MEPCEQ7L2J0 689 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 TGIF2LYQ8IUE0 185 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 CPOQ8IVL8 374 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 STX19Q8N4C7 294 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 SLC37A3Q8NCC5 494 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 KBTBD8Q8NFY9 601 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 OR52E2Q8NGJ4 325 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 OR2T4Q8NH00 348 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 OR4K13Q8NH42 304 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 SMAP2Q8WU79 429 aaPredicted RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 FCGR1BQ92637 280 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 TXNDC15Q96J42 360 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 KCNS3Q9BQ31 491 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 C1QTNF6Q9BXI9 259 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 ULBP2Q9BZM5 246 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 HINT3Q9NQE9 182 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
CLK3-218ENST00000566926 MOKQ9UQ07 419 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 ADAM18Q9Y3Q7 739 aa11.72□□□□□ -0.53
CLK3-218ENST00000566926 TEX13CA0A0J9YWL9 993 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 F13BP05160 661 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 CDK1P06493 297 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms