RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 A0A1B0GWB2 263 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 GOLGA8IPA6NC78 632 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 EFCAB7A8K855 629 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 FOXI3A8MTJ6 420 aaPredicted RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 hCG_2039718K7EN88 272 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 GABRPO00591 440 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TNFSF11O14788 317 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 LIN7AO14910 233 aaPredicted RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 AQP9O43315 295 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC2A10O95528 541 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 DUS4LO95620 317 aaKnown RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 RAB3DO95716 219 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 LALBAP00709 142 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 GCGP01275 180 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ARG1P05089 322 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 GP1BAP07359 652 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SNRPCP09234 159 aaKnown RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TRIM49P0CI25 452 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TRIM49CP0CI26 452 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 HLA-GP17693 338 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TCP1P17987 556 aaKnown RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 CHRNB4P30926 498 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 NR4A2P43354 598 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TFPI2P48307 235 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ALDH3B2P48448 385 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 CSNK1DP48730 415 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 HCAR3P49019 387 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SUB1P53999 127 aaKnown RBP eCLIP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 EMP2P54851 167 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SSBP2P81877 361 aaPredicted RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 CYCSP99999 105 aaKnown RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC39A6Q13433 755 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TPBGQ13641 420 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF146Q15072 292 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 QRICH1Q2TAL8 776 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 BSPRYQ5W0U4 402 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 FAM53AQ6NSI3 398 aaPredicted RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 CLEC18BQ6UXF7 455 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ACOT7LQ6ZUV0 252 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 LRRTM1Q86UE6 522 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 CATSPER3Q86XQ3 398 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 PIANPQ8IYJ0 282 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ABHD12Q8N2K0 398 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SVOPLQ8N434 492 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 OR8J2Q8NGG1 315 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 OR6K6Q8NGW6 343 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 OR6K2Q8NGY2 324 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 OR2L8Q8NGY9 312 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 OR51A7Q8NH64 312 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 OR51E1Q8TCB6 317 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF524Q96C55 264 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC25A38Q96DW6 304 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 CIB1Q99828 191 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TMEM204Q9BSN7 226 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 PARD6GQ9BYG4 376 aaPredicted RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 DDX31Q9H8H2 851 aaKnown RBP2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 PLEKHA1Q9HB21 404 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ISYNA1Q9NPH2 558 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 IFT46Q9NQC8 304 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 MIEF1Q9NQG6 463 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 PLCXD1Q9NUJ7 323 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 RMND1Q9NWS8 449 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SDHAF2Q9NX18 166 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 TREM2Q9NZC2 230 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 SPRR3Q9UBC9 169 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 HYOU1Q9Y4L1 999 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 MYH15Q9Y2K3 1946 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 FHAD1B1AJZ9 1412 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 DLC1Q96QB1 1528 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 COL16A1Q07092 1604 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 BIVM-ERCC5R4GMW8 1640 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 IGKV1D-8A0A087WSZ0 117 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 A0A1B0GVI7 797 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 BCLAF3A2AJT9 711 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 GOLGA6L10A6NI86 522 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 A6NIZ1 184 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 PMS2P5A8MQ11 134 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 F8VP50 259 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 RAD51BO15315 384 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 TOX3O15405 576 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 TRAPPC3O43617 180 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 MGRN1O60291 552 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 ICOSLGO75144 302 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 PTTG1O95997 202 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 ACTL6AO96019 429 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 IGHG1P01857 330 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 HCKP08631 526 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 KRT7P08729 469 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 GIMD1P0DJR0 217 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 PLA2G2AP14555 144 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 CNR1P21554 472 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 IGFBP5P24593 272 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 CXCR2P25025 360 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 HLA-DMAP28067 261 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 PPP1R2P41236 205 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 XKP51811 444 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 RAP1BP61224 184 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 PITPNAQ00169 270 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC25A11Q02978 314 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 OR4D1Q15615 310 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms