RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 ZNF426Q9BUY5 554 aa14.08□□□□□ -0.16
TSR3-202ENST00000566296 CCNB1IP1Q9NPC3 277 aa14.08□□□□□ -0.16
TSR3-202ENST00000566296 DCAF13Q9NV06 445 aaKnown RBP14.08□□□□□ -0.16
TSR3-202ENST00000566296 POMPQ9Y244 141 aa14.08□□□□□ -0.16
TSR3-202ENST00000566296 WIPI2Q9Y4P8 454 aa14.08□□□□□ -0.16
TSR3-202ENST00000566296 TMEM89A2RUT3 159 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 ERICH4A6NGS2 130 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 ACOT8O14734 319 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 PLPP2O43688 288 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 CIB2O75838 187 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 ZNF682O95780 498 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 IGHV2-5P01817 119 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 THY1P04216 161 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 GCH1P30793 250 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 ZNF81P51508 661 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 MS4A2Q01362 244 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 FLOT2Q14254 428 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 FAM209AQ5JX71 171 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 DCAF12L2Q5VW00 463 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 UNQ6126/PRO20091Q6UXV3 157 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 OR4D11Q8NGI4 311 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 ASB10Q8WXI3 467 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 LRGUKQ96M69 825 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 GAL3ST1Q99999 423 aa14.07□□□□□ -0.16
TSR3-202ENST00000566296 DEAF1O75398 565 aaPredicted RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 TRMUO75648 421 aaKnown RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 IGHV3-13P01766 116 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 F13BP05160 661 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 MMP7P09237 267 aaPredicted RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 NR2C1P13056 603 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 RPL18Q07020 188 aaKnown RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 SLC3A1Q07837 685 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 PABPC1L2AQ5JQF8 200 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 C10orf128Q5T292 105 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 CYP2R1Q6VVX0 501 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 C1orf229Q6ZS94 237 aaPredicted RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 SYT14Q8NB59 555 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 CPEB3Q8NE35 698 aaKnown RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 SGMS2Q8NHU3 365 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 NANPQ8TBE9 248 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 GTF3AQ92664 365 aaKnown RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 TPD52L3Q96J77 140 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 TMPRSS13Q9BYE2 586 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 INIPQ9NRY2 104 aa14.06□□□□□ -0.16
TSR3-202ENST00000566296 EIF3KQ9UBQ5 218 aaKnown RBP14.06□□□□□ -0.16
TSR3-202ENST00000566296 PLSCR5A0PG75 271 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 ISPDA4D126 451 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 AQP12BA6NM10 295 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 SPRY3O43610 288 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 OR7A10O76100 309 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 AVPP01185 164 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 ACADSP16219 412 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 ATP6V1B2P21281 511 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 GATA3P23771 443 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 STOMP27105 288 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 UGT2B15P54855 530 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 TAS2R41P59536 307 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 CD47Q08722 323 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 HIST3H3Q16695 136 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 ZNF718Q3SXZ3 478 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 TSPYL5Q86VY4 417 aaPredicted RBP14.05□□□□□ -0.16
TSR3-202ENST00000566296 AQP12AQ8IXF9 295 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 UTP4Q969X6 686 aaKnown RBP14.05□□□□□ -0.16
TSR3-202ENST00000566296 SGTBQ96EQ0 304 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 SEPHS2Q99611 448 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 SLC6A7Q99884 636 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 PRSS27Q9BQR3 290 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 MRPL13Q9BYD1 178 aaKnown RBP14.05□□□□□ -0.16
TSR3-202ENST00000566296 EGLN1Q9GZT9 426 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 SIAEQ9HAT2 523 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 MEPEQ9NQ76 525 aaPredicted RBP14.05□□□□□ -0.16
TSR3-202ENST00000566296 SH3GLB1Q9Y371 365 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 CACNG2Q9Y698 323 aa14.05□□□□□ -0.16
TSR3-202ENST00000566296 MGAM2Q2M2H8 2515 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 TANC2Q9HCD6 1990 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 MT-ND1P03886 318 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 ZNF32P17041 273 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 ADRA2CP18825 462 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 FUT1P19526 365 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 MAKP20794 623 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 RBM34P42696 430 aaKnown RBP14.04□□□□□ -0.16
TSR3-202ENST00000566296 GDI2P50395 445 aaKnown RBP14.04□□□□□ -0.16
TSR3-202ENST00000566296 ZNF133P52736 654 aaPredicted RBP14.04□□□□□ -0.16
TSR3-202ENST00000566296 MRPS34P82930 218 aaKnown RBP14.04□□□□□ -0.16
TSR3-202ENST00000566296 IFI44LQ53G44 452 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 SPATA46Q5T0L3 261 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 C1orf146Q5VVC0 180 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 FKBP9P1Q75LS8 142 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 PFN4Q8NHR9 129 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 IPCEF1Q8WWN9 437 aaPredicted RBP14.04□□□□□ -0.16
TSR3-202ENST00000566296 GEMIN6Q8WXD5 167 aaKnown RBP14.04□□□□□ -0.16
TSR3-202ENST00000566296 CCL17Q92583 94 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 PYURFQ96I23 114 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 HSH2DQ96JZ2 352 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 SMURF2Q9HAU4 748 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 CYSLTR2Q9NS75 346 aa14.04□□□□□ -0.16
TSR3-202ENST00000566296 CGGBP1Q9UFW8 167 aaPredicted RBP14.04□□□□□ -0.16
TSR3-202ENST00000566296 ARHGAP32A7KAX9 2087 aa14.03□□□□□ -0.16
TSR3-202ENST00000566296 TCRBV5S2A0A599 114 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms