RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 NPR2P20594 1047 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 EGR3Q06889 387 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 ACSM1Q08AH1 577 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 STK11Q15831 433 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 PCSK4Q6UW60 755 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 SEM1Q6ZVN7 128 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 VASH1Q7L8A9 365 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-213ENST00000565834 FAM220AQ7Z4H9 259 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 DCXRQ7Z4W1 244 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 ABHD12BQ7Z5M8 362 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-213ENST00000565834 CLVS1Q8IUQ0 354 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-213ENST00000565834 OR2AJ1Q8NGZ0 328 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 AMELYQ99218 206 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 FOXB1Q99853 325 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 ABHD6Q9BV23 337 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 FAM192AQ9GZU8 254 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 TRIM36Q9NQ86 728 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 BABAM2Q9NXR7 383 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 IKZF2Q9UKS7 526 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF835Q9Y2P0 537 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 USP24Q9UPU5 2620 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 NBEAQ8NFP9 2946 aa16.51■□□□□ 0.23
COMMD4-213ENST00000565834 CCDC160A6NGH7 325 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 H3BSA7 217 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 RPL36A-HNRNPH2H7BZ11 118 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 PSMD9O00233 223 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 LALBAP00709 142 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 KRT8P05787 483 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 RGS6P49758 472 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF684Q5T5D7 378 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 GPR107Q5VW38 600 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 KCTD18Q6PI47 426 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-213ENST00000565834 CORO6Q6QEF8 472 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 KCTD20Q7Z5Y7 419 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 OR6K3Q8NGY3 331 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 OR52N5Q8NH56 324 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 YIPF6Q96EC8 236 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 WBP1Q96G27 269 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF416Q9BWM5 594 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 RBM38Q9H0Z9 239 aaKnown RBP16.5■□□□□ 0.23
COMMD4-213ENST00000565834 SIAEQ9HAT2 523 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 PRSS50Q9UI38 385 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 LHFPL6Q9Y693 200 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 METTL15A6NJ78 407 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 CCRL2O00421 344 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 SULT1C4O75897 302 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 TACSTD2P09758 323 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 OR8G3PP0DMU2 310 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 B4GALT1P15291 398 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 CD36P16671 472 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 TGFBR2P37173 567 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 KIR2DL2P43627 348 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-213ENST00000565834 BDH1Q02338 343 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 FAPQ12884 760 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 EIF2S3LQ2VIR3 472 aaKnown RBP16.5■□□□□ 0.23
COMMD4-213ENST00000565834 FAM27BQ5VT28 67 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 FBXW9Q5XUX1 488 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 C3P1Q6ZMU1 363 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 DOLPP1Q86YN1 238 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 EGFL6Q8IUX8 553 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 ST7LQ8TDW4 575 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 UFD1Q92890 307 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 OR8B4Q96RC9 309 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 FUNDC2Q9BWH2 189 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 ACOXLQ9NUZ1 547 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 ASH2LQ9UBL3 628 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 MALT1Q9UDY8 824 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 MRM2Q9UI43 246 aaKnown RBP16.5■□□□□ 0.23
COMMD4-213ENST00000565834 GDF2Q9UK05 429 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-213ENST00000565834 CEPT1Q9Y6K0 416 aa16.5■□□□□ 0.23
COMMD4-213ENST00000565834 SHANK1Q9Y566 2161 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 IL2RAP01589 272 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 CRHP06850 196 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 TMIGD3P0DMS9 266 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-213ENST00000565834 CPEP16870 476 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 TIMP3P35625 211 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 GBX2P52951 348 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-213ENST00000565834 TAS2R43P59537 309 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 ROM1Q03395 351 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 LIPKQ5VXJ0 399 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 FOXB2Q5VYV0 432 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 TFAP2EQ6VUC0 442 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 KRT77Q7Z794 578 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 LRRC18Q8N456 261 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 RPRMLQ8N4K4 120 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 YIPF7Q8N8F6 280 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 ZFP41Q8N8Y5 198 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 PELI1Q96FA3 418 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 ZFP3Q96NJ6 502 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 CNTNAP3BQ96NU0 1288 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 MROQ9BYG7 248 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 CNTNAP3Q9BZ76 1288 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 C1orf198Q9H425 327 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 SLCO1C1Q9NYB5 712 aa16.49■□□□□ 0.23
COMMD4-213ENST00000565834 PNMA8CA0A1B0GUJ8 204 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 TOXO94900 526 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 ARF1P84077 181 aaKnown RBP16.48■□□□□ 0.23
COMMD4-213ENST00000565834 FOXF2Q12947 444 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 TPBGQ13641 420 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 ENDOGQ14249 297 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms