RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 DGCR6Q14129 220 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 MOGQ16653 247 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 ZNF718Q3SXZ3 478 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 SPATA46Q5T0L3 261 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 MBNL2Q5VZF2 373 aaKnown RBP13.34□□□□□ -0.27
CDH3-204ENST00000565453 ZNF774Q6NX45 483 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 CYP4Z1Q86W10 505 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 IPCEF1Q8WWN9 437 aaPredicted RBP13.34□□□□□ -0.27
CDH3-204ENST00000565453 CMTM5Q96DZ9 223 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 FAM46AQ96IP4 442 aaKnown RBP13.34□□□□□ -0.27
CDH3-204ENST00000565453 NARFLQ9H6Q4 476 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 EIF3KQ9UBQ5 218 aaKnown RBP13.34□□□□□ -0.27
CDH3-204ENST00000565453 EGFL7Q9UHF1 273 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 RPS6KA6Q9UK32 745 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 TMEM5Q9Y2B1 443 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 ATP8B1O43520 1251 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 AHCYL1O43865 530 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 CDC14BO60729 498 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 NGFP01138 241 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 H1F0P07305 194 aaKnown RBP13.33□□□□□ -0.28
CDH3-204ENST00000565453 GAAP10253 952 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 DRD4P21917 467 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 RPL4P36578 427 aaKnown RBP13.33□□□□□ -0.28
CDH3-204ENST00000565453 OMPP47874 163 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 PCBD1P61457 104 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 GLYATQ6IB77 296 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 ALDH16A1Q8IZ83 802 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 FAM86B1Q8N7N1 296 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 KLF14Q8TD94 323 aaPredicted RBP13.33□□□□□ -0.28
CDH3-204ENST00000565453 DHRS1Q96LJ7 313 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 GPX7Q96SL4 187 aaPredicted RBP13.33□□□□□ -0.28
CDH3-204ENST00000565453 FUZQ9BT04 418 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 WACQ9BTA9 647 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 REPIN1Q9BWE0 567 aaKnown RBP13.33□□□□□ -0.28
CDH3-204ENST00000565453 OR2J1Q9GZK6 312 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 EMC7Q9NPA0 242 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 DCAF13Q9NV06 445 aaKnown RBP13.33□□□□□ -0.28
CDH3-204ENST00000565453 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 GRHPRQ9UBQ7 328 aa13.33□□□□□ -0.28
CDH3-204ENST00000565453 IGHV1-69-2A0A0G2JMI3 117 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 TRBV4-1A0A0J9YWV2 114 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 PRSS37A4D1T9 235 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 ZSCAN5BA6NJL1 495 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 C12orf71A8MTZ7 269 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 H3BSA7 217 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 NDUFB2O95178 105 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 IGHV1-46P01743 117 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 CTLA4P16410 223 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 RHCEP18577 417 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 GCH1P30793 250 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 GUCA1AP43080 201 aaPredicted RBP13.32□□□□□ -0.28
CDH3-204ENST00000565453 ZNF81P51508 661 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 FXYD6P3P58550 94 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 PPP1CBP62140 327 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 TEKQ02763 1124 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 SEC23BQ15437 767 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 TSTQ16762 297 aaKnown RBP13.32□□□□□ -0.28
CDH3-204ENST00000565453 FAM209AQ5JX71 171 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 UNQ6126/PRO20091Q6UXV3 157 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 USP51Q70EK9 711 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 GLCCI1Q86VQ1 547 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 C1orf174Q8IYL3 243 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 ABHD4Q8TB40 342 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 TMEM186Q96B77 213 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 RASD2Q96D21 266 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 ZNF570Q96NI8 536 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 SPAG4Q9NPE6 437 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 NRIP3Q9NQ35 241 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 KLHL21Q9UJP4 597 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 CACNG2Q9Y698 323 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 STAB1Q9NY15 2570 aa13.32□□□□□ -0.28
CDH3-204ENST00000565453 TEX13CA0A0J9YWL9 993 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 IMPA2O14732 288 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 SNX3O60493 162 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 MT-ND5P03915 603 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 SEMG1P04279 462 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 MSMBP08118 114 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 ADH4P08319 380 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 COX5BP10606 129 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 KRR1Q13601 381 aaKnown RBP13.31□□□□□ -0.28
CDH3-204ENST00000565453 RRM2BQ7LG56 351 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 RSRC1Q96IZ7 334 aaKnown RBP13.31□□□□□ -0.28
CDH3-204ENST00000565453 C4orf45Q96LM5 186 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 GPA33Q99795 319 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 POFUT1Q9H488 388 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 GORASP2Q9H8Y8 452 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 SAP30LQ9HAJ7 183 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 DECR2Q9NUI1 292 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 VSX1Q9NZR4 365 aaPredicted RBP13.31□□□□□ -0.28
CDH3-204ENST00000565453 NDRG4Q9ULP0 352 aaKnown RBP13.31□□□□□ -0.28
CDH3-204ENST00000565453 SAMD4AQ9UPU9 718 aaKnown RBP13.31□□□□□ -0.28
CDH3-204ENST00000565453 FAM32AQ9Y421 112 aaKnown RBP13.31□□□□□ -0.28
CDH3-204ENST00000565453 FBN3Q75N90 2809 aa13.31□□□□□ -0.28
CDH3-204ENST00000565453 XKRYO14609 159 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 SPRY3O43610 288 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 DEAF1O75398 565 aaPredicted RBP13.3□□□□□ -0.28
CDH3-204ENST00000565453 DIRAS1O95057 198 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms