RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 C11orf40Q8WZ69 217 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 NEUROG1Q92886 237 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 NINJ1Q92982 152 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 MS4A3Q96HJ5 214 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 ZNF75AQ96N20 296 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 DDOQ99489 341 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 CCL19Q99731 98 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 CIB1Q99828 191 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 DHRS9Q9BPW9 319 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 C9orf16Q9BUW7 83 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 OR2H1Q9GZK4 316 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 NOX3Q9HBY0 568 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 TVP23BQ9NYZ1 205 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 PLEKHA6Q9Y2H5 1048 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 DCHS2Q6V1P9 2916 aa13.87□□□□□ -0.19
RAB40C-208ENST00000564703 DSCAMO60469 2012 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 IGLV1-36A0A0B4J1U3 117 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 IGHV2OR16-5A0A0B4J2B6 119 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 CYSRT1A8MQ03 144 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 MITFO75030 526 aaPredicted RBP13.86□□□□□ -0.19
RAB40C-208ENST00000564703 SCG5P05408 212 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 CCNOP22674 350 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 STOMP27105 288 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 APOBEC3AP31941 199 aaPredicted RBP13.86□□□□□ -0.19
RAB40C-208ENST00000564703 PYCR1P32322 319 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 GDI2P50395 445 aaKnown RBP13.86□□□□□ -0.19
RAB40C-208ENST00000564703 SLC25A1P53007 311 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 PSG4Q00888 419 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 AQP6Q13520 282 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 DAG1Q14118 895 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 ENDOGQ14249 297 aaKnown RBP13.86□□□□□ -0.19
RAB40C-208ENST00000564703 AGAP6Q5VW22 663 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 ZNF544Q6NX49 715 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 UGT2A3Q6UWM9 527 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 UNQ6126/PRO20091Q6UXV3 157 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 GJC3Q8NFK1 279 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 OR9Q1Q8NGQ5 310 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 AKR7LQ8NHP1 331 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 TMEM171Q8WVE6 324 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 EME1Q96AY2 570 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 SLC25A19Q9HC21 320 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 EIF3KQ9UBQ5 218 aaKnown RBP13.86□□□□□ -0.19
RAB40C-208ENST00000564703 ITGB1BP2Q9UKP3 347 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 LAMP3Q9UQV4 416 aa13.86□□□□□ -0.19
RAB40C-208ENST00000564703 APCP25054 2843 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 E7EQL1 145 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 SURF4O15260 269 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 SGCEO43556 437 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 BMP4P12644 408 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 ZNF35P13682 527 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 NR4A1P22736 598 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 APEX1P27695 318 aaKnown RBP13.85□□□□□ -0.19
RAB40C-208ENST00000564703 CALCRP30988 508 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 RAD23AP54725 363 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 VHLLQ6RSH7 139 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 ARL9Q6T311 187 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 ZBTB49Q6ZSB9 765 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 CPEB3Q8NE35 698 aaKnown RBP13.85□□□□□ -0.19
RAB40C-208ENST00000564703 OR51L1Q8NGJ5 315 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 OR6K6Q8NGW6 343 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 OR51V1Q9H2C8 321 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 CXorf56Q9H5V9 222 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 PLEK2Q9NYT0 353 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 H2AFY2Q9P0M6 372 aaPredicted RBP13.85□□□□□ -0.19
RAB40C-208ENST00000564703 ASH2LQ9UBL3 628 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 KCNG2Q9UJ96 466 aa13.85□□□□□ -0.19
RAB40C-208ENST00000564703 FAM183AA6NL82 134 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 GPANK1O95872 356 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 SPI1P17947 270 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 CD53P19397 219 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 TTKP33981 857 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 RAD52P43351 418 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 ALDH3A2P51648 485 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 PPP2R2BQ00005 443 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 MEP1BQ16820 701 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 KRT80Q6KB66 452 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 ZNF774Q6NX45 483 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 PLBD1Q6P4A8 553 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 MYPOPQ86VE0 399 aaPredicted RBP13.84□□□□□ -0.19
RAB40C-208ENST00000564703 CPOQ8IVL8 374 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 CBR4Q8N4T8 237 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 NUP37Q8NFH4 326 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 SLC26A10Q8NG04 563 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 PTP4A1Q93096 173 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 NMNAT2Q9BZQ4 307 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 WNT5BQ9H1J7 359 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 RIBC2Q9H4K1 309 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 CA10Q9NS85 328 aa13.84□□□□□ -0.19
RAB40C-208ENST00000564703 NDRG4Q9ULP0 352 aaKnown RBP13.84□□□□□ -0.19
RAB40C-208ENST00000564703 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 EI24O14681 340 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 DOK2O60496 412 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 SMPD2O60906 423 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 ATE1O95260 518 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 TFP02787 698 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 GYPBP06028 91 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 GAAP10253 952 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 COX5BP10606 129 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 CCL2P13500 99 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 SERPINF1P36955 418 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms