RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 EID2Q8N6I1 236 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 OR2G2Q8NGZ5 317 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC22A8Q8TCC7 542 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 GPR148Q8TDV2 347 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 C15orf40Q8WUR7 153 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 THEM6Q8WUY1 208 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 RAB40AQ8WXH6 277 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 NSMAFQ92636 917 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 CREB3L1Q96BA8 519 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 GUCD1Q96NT3 240 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 GFM1Q96RP9 751 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 HDHD2Q9H0R4 259 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF275Q9NSD4 429 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 AK6Q9Y3D8 172 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 ALPK2Q86TB3 2170 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 IGLV1-36A0A0B4J1U3 117 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TRBV11-1A0A0K0K1C0 115 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC22A23A1A5C7 686 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TMEM221A6NGB7 291 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TVP23AA6NH52 213 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 MS4A18H0YCH9 400 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF593O00488 134 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 NTN3O00634 580 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 GMFGO60234 142 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF354AO60765 605 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF254O75437 659 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 RPP14O95059 124 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 CCKBRP32239 447 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC6A9P48067 706 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 DAP3P51398 398 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 INSM1Q01101 510 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 NTRK2Q16620 822 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 MS4A18Q3C1V0 323 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TEX30Q5JUR7 227 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 STAC2Q6ZMT1 411 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 Q7L0L9 218 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 LINC00346Q8IVM7 164 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 OR5H6Q8NGV6 325 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF417Q8TAU3 575 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF671Q8TAW3 534 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 IFI44Q8TCB0 444 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 RNF128Q8TEB7 428 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC7A6Q92536 515 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ST6GAL2Q96JF0 529 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 OR8B4Q96RC9 309 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF587Q96SQ5 575 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 OR2B2Q9GZK3 357 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ABCG5Q9H222 651 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 NEK6Q9HC98 313 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 PCDHB16Q9NRJ7 776 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SERINC1Q9NRX5 453 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 COPZ2Q9P299 210 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 NLKQ9UBE8 527 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 IKZF2Q9UKS7 526 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 B3GALT5Q9Y2C3 310 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 LOC102723996A0A087X1L8 192 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TRBV5-7A0A0A0MS05 114 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 C4orf47A7E2U8 309 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 C17orf51A8MQB3 221 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 H7C1C5 153 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 PSMD9O00233 223 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 GPR171O14626 319 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC16A7O60669 478 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TSPAN9O75954 239 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 HLA-DQA2P01906 255 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 KLK3P07288 261 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 QDPRP09417 244 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SNRPBP14678 240 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 CFPP27918 469 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ADH6P28332 368 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF41P51814 821 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SOX8P57073 446 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 RAB25P57735 213 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 LCN6P62502 163 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 MRPS10P82664 201 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZXDAP98168 799 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZFP36L1Q07352 338 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SNTA1Q13424 505 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 DYRK1AQ13627 763 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 GPR176Q14439 515 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC17A1Q14916 467 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TATDN3Q17R31 274 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TIGD3Q6B0B8 471 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TMEM81Q6P7N7 255 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 DEGS2Q6QHC5 323 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 LRRN1Q6UXK5 716 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 IL20RBQ6UXL0 311 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 UBE2J2Q8N2K1 259 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TOMM5Q8N4H5 51 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF676Q8N7Q3 588 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 MAFAQ8NHW3 353 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ELP5Q8TE02 316 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 RGP1Q92546 391 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 CTRCQ99895 268 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 TRAF4Q9BUZ4 470 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 DEFB126Q9BYW3 111 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 OR11A1Q9GZK7 315 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 AP5S1Q9NUS5 200 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 KLRF1Q9NZS2 232 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 PPP4R1LQ9P1A2 415 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms