RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 GTF2F2P13984 249 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PVALBP20472 110 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PTNP21246 168 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ACHEP22303 614 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 CMPK1P30085 196 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PRSS3P35030 304 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 NAA10P41227 235 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 DIO1P49895 249 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 MEOX2P50222 304 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 RAB28P51157 221 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 NR0B1P51843 470 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 HCCSP53701 268 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PTTG1IPP53801 180 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 CLDN12P56749 244 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 CLDN2P57739 230 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TAS2R19P59542 299 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ACTBP60709 375 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PPIAP62937 165 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ACTG1P63261 375 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TNFRSF17Q02223 184 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OC90Q02509 493 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ALKBH1Q13686 389 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SNTB1Q13884 538 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 MELKQ14680 651 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PON3Q15166 354 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 LTB4RQ15722 352 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 HSPB2Q16082 182 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 DUSP5Q16690 384 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ISXQ2M1V0 245 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TCTN1Q2MV58 587 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 POM121L1PQ3SYA9 428 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 Q499Y3 187 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PAN3Q58A45 887 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 DCST2Q5T1A1 773 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 C10orf91Q5T1B1 145 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 AVPI1Q5T686 147 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 DCAF12L2Q5VW00 463 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ELP2Q6IA86 826 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 JMJD6Q6NYC1 403 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ACOT7LQ6ZUV0 252 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ERN2Q76MJ5 926 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 RHOUQ7L0Q8 258 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 LRRTM1Q86UE6 522 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SKA3Q8IX90 412 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF595Q8IYB9 648 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SPAG16Q8N0X2 631 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 BEST3Q8N1M1 668 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 LRRC25Q8N386 305 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 RFLNBQ8N5W9 214 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF610Q8N9Z0 462 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 LINC01555Q8NAE3 123 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TMEM229BQ8NBD8 167 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SDR9C7Q8NEX9 313 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 STEAP2Q8NFT2 490 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OR7G2Q8NG99 324 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OR2A1Q8NGT9 310 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OR8K3Q8NH51 312 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OR51A7Q8NH64 312 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 CPT1CQ8TCG5 803 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OR8D1Q8WZ84 308 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 HERVK_113Q902F9 699 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ARL11Q969Q4 196 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ARRDC3Q96B67 414 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OTUB2Q96DC9 234 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TNFRSF13CQ96RJ3 184 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 STACQ99469 402 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PDCD10Q9BUL8 212 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 POTEKPQ9BYX7 375 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TRIM2Q9C040 744 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SEMA4CQ9C0C4 833 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF350Q9GZX5 532 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ESRP2Q9H6T0 727 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TMEM185BQ9H7F4 350 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 MEPEQ9NQ76 525 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SLC17A5Q9NRA2 495 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 POLE3Q9NRF9 147 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 CTSFQ9UBX1 484 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 CHRNA9Q9UGM1 479 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 APOBEC3BQ9UH17 382 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 STEAP1Q9UHE8 339 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF107Q9UII5 783 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 FBXL4Q9UKA2 621 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TNFSF18Q9UNG2 199 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 CARHSP1Q9Y2V2 147 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF337Q9Y3M9 751 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ENTPD2Q9Y5L3 495 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 GOLGA4Q13439 2230 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TRBV5-7A0A0A0MS05 114 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 IGKV1-8A0A0C4DH67 115 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 A0A1B0GTI1 187 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 TMEM272A0A1B0GTI8 110 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 EDDM13A0A1B0GTR0 161 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 A0A1W2PS29 197 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 PGPEP1LA6NFU8 196 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 GGT3PA6NGU5 568 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 OR5H14A6NHG9 310 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 RHPN2P1A8MT19 583 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 GPR89AB7ZAQ6 455 aa4.25□□□□□ -1.73
CAPN3-212ENST00000564503 ARPC3O15145 178 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms