RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 KRCC1Q9NPI7 259 aaPredicted RBP17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 NRIP3Q9NQ35 241 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 TIMM10BQ9Y5J6 103 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 LOC100289279A0A1B0GTE1 492 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 SOCS2O14508 198 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 LILRA1O75019 489 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 TACSTD2P09758 323 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 COL8A2P25067 703 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 SDHAP31040 664 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 MAGEB1P43366 347 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 SELENOVP59797 346 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 PCBD1P61457 104 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 OTPQ5XKR4 325 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 RFPL4BQ6ZWI9 263 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 YIPF5Q969M3 257 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 MCUR1Q96AQ8 359 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 SYT4Q9H2B2 425 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 CHODLQ9H9P2 273 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 HINT3Q9NQE9 182 aaKnown RBP17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 NDE1Q9NXR1 346 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 IER3IP1Q9Y5U9 82 aa17.08■□□□□ 0.32
SHCBP1-203ENST00000564272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.07■□□□□ 0.322e-10■■■■■ 39.2
SHCBP1-203ENST00000564272 C12orf71A8MTZ7 269 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 LMX1BO60663 402 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 GADD45GO95257 159 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 FABP3P05413 133 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 IGFBP5P24593 272 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 MPV17P39210 176 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 CHN2P52757 468 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 TMEM255AQ5JRV8 349 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 GPR139Q6DWJ6 353 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 FAM166AQ6J272 317 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 PTCHD4Q6ZW05 846 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 ZER1Q7Z7L7 766 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 FITM2Q8N6M3 262 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 FANK1Q8TC84 345 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 SNX33Q8WV41 574 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 RDH5Q92781 318 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 CCT8L2Q96SF2 557 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 MDFIQ99750 246 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 RERGLQ9H628 205 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 TMEM160Q9NX00 188 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 SLCO1C1Q9NYB5 712 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 EIF3KQ9UBQ5 218 aaKnown RBP17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 GPR160Q9UJ42 338 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 CDC42EP3Q9UKI2 254 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 KCNS2Q9ULS6 477 aa17.07■□□□□ 0.32
SHCBP1-203ENST00000564272 C17orf100A8MU93 164 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 AHCYL1O43865 530 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 SLC16A7O60669 478 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 PPP1R3DO95685 299 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 ATP6V1B2P21281 511 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 RRM2P31350 389 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 SMIM11AP58511 58 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 TMEM154Q6P9G4 183 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 SMARCD3Q6STE5 483 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 CYP2R1Q6VVX0 501 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 DPY19L2P2Q6ZN68 376 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 ALDH16A1Q8IZ83 802 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 ABHD4Q8TB40 342 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 SLC25A40Q8TBP6 338 aa17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 IPCEF1Q8WWN9 437 aaPredicted RBP17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 VSX1Q9NZR4 365 aaPredicted RBP17.06■□□□□ 0.32
SHCBP1-203ENST00000564272 DOK2O60496 412 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 MPZL1O95297 269 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 TXNDC12O95881 172 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 TGFAP01135 160 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 ACHEP22303 614 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 RPS6KA3P51812 740 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 CCL8P80075 99 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 CCNIQ14094 377 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 IL17RELQ6ZVW7 336 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 SYT9Q86SS6 491 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 ADCK1Q86TW2 530 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 ZDHHC21Q8IVQ6 265 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 MARS2Q96GW9 593 aaKnown RBP17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 BEX2Q9BXY8 128 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 OR2J1Q9GZK6 312 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 NARFLQ9H6Q4 476 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 IL1RAPQ9NPH3 570 aa17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 ZNF275Q9NSD4 429 aaPredicted RBP17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 COA3Q9Y2R0 106 aaPredicted RBP17.05■□□□□ 0.32
SHCBP1-203ENST00000564272 B2RBV5 119 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 OR10H3O60404 316 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 KHDRBS3O75525 346 aaKnown RBP17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 RP2O75695 350 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 NGFP01138 241 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 IGHV3-13P01766 116 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 FPR3P25089 353 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 GCH1P30793 250 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 CDKN2AP42771 156 aaKnown RBP17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 GPR6P46095 362 aaPredicted RBP17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 PPP1CBP62140 327 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 SCRN3Q0VDG4 424 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 ZNF718Q3SXZ3 478 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 SPATS1Q496A3 300 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 ERMAPQ96PL5 475 aaPredicted RBP17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 NUAK2Q9H093 628 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 SHARPINQ9H0F6 387 aa17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 OR52D1Q9H346 318 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms