RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KCNMB1Q16558 191 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 NRN1LQ496H8 165 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 C9orf135Q5VTT2 229 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF813Q6ZN06 617 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 FOXL2NBQ6ZUU3 175 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 AHSA2Q719I0 299 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 SHFQ7M4L6 423 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF295-AS1Q8N0V1 137 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 OR6N2Q8NGY6 317 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 C11orf40Q8WZ69 217 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 KISS1RQ969F8 398 aaPredicted RBP14.88□□□□□ -0.03
CMTM3-208ENST00000564247 MYCBPQ99417 103 aaPredicted RBP14.88□□□□□ -0.03
CMTM3-208ENST00000564247 MNTQ99583 582 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 YIPF3Q9GZM5 350 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 DUSP21Q9H596 190 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 MARCH7Q9H992 704 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 ADGRL4Q9HBW9 690 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 FGF20Q9NP95 211 aaPredicted RBP14.88□□□□□ -0.03
CMTM3-208ENST00000564247 POLE4Q9NR33 117 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 TMEM38BQ9NVV0 291 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 CHCHD3Q9NX63 227 aaKnown RBP14.88□□□□□ -0.03
CMTM3-208ENST00000564247 TAS2R16Q9NYV7 291 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 KCNG2Q9UJ96 466 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 POLR1DQ9Y2S0 133 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 EEF1E1-BLOC1S5C9J1V9 151 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 EEF1E1O43324 174 aaKnown RBP14.87□□□□□ -0.03
CMTM3-208ENST00000564247 RGS10O43665 173 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 MPZL1O95297 269 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 RAB36O95755 333 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 TFP02787 698 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 OR2T7P0C7T2 308 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 GAAP10253 952 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 NAA10P41227 235 aaPredicted RBP14.87□□□□□ -0.03
CMTM3-208ENST00000564247 KCTD21Q4G0X4 260 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 TEX30Q5JUR7 227 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 FAM27BQ5VT28 67 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 LUZP2Q86TE4 346 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 SLC35F2Q8IXU6 374 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 TIGD4Q8IY51 512 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 SLC22A24Q8N4F4 322 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 OR10H4Q8NGA5 316 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 OR4F15Q8NGB8 312 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 OR52I1Q8NGK6 324 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 OR2AJ1Q8NGZ0 328 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 OR2T27Q8NH04 317 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 WDR76Q9H967 626 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 MRPL22Q9NWU5 206 aaKnown RBP14.87□□□□□ -0.03
CMTM3-208ENST00000564247 TMEM14AQ9Y6G1 99 aa14.87□□□□□ -0.03
CMTM3-208ENST00000564247 MAGEA13PA6NCF6 341 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 C12orf71A8MTZ7 269 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 A8MXE2 369 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF670-ZNF695F2Z2N8 137 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 SELENOFO60613 162 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 MRPS14O60783 128 aaKnown RBP14.86□□□□□ -0.03
CMTM3-208ENST00000564247 APOL3O95236 402 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 RPSAP08865 295 aaKnown RBP14.86□□□□□ -0.03
CMTM3-208ENST00000564247 SPARCP09486 303 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 B4GALT1P15291 398 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 IGHV1-2P23083 117 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 SSTR2P30874 369 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ACTC1P68032 377 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ACTA1P68133 377 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 SLC35A2P78381 396 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 MEP1BQ16820 701 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 OR7E24Q6IFN5 339 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ANKRD16Q6P6B7 361 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 LYPD4Q6UWN0 246 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF627Q7L945 461 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 DMRTC2Q8IXT2 367 aaPredicted RBP14.86□□□□□ -0.03
CMTM3-208ENST00000564247 GABRG1Q8N1C3 465 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ACBD7Q8N6N7 88 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF454Q8N9F8 522 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 C14orf79Q96F83 325 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 MRPL48Q96GC5 212 aaKnown RBP14.86□□□□□ -0.03
CMTM3-208ENST00000564247 WACQ9BTA9 647 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 HDHD5Q9BXW7 423 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 CCDC90BQ9GZT6 254 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 EMC7Q9NPA0 242 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 INPP5EQ9NRR6 644 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 FKBP14Q9NWM8 211 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 ELOVL5Q9NYP7 299 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 LAMP5Q9UJQ1 280 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 SNX5Q9Y5X3 404 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 COMMD3-BMI1R4GMX3 469 aa14.86□□□□□ -0.03
CMTM3-208ENST00000564247 DAPL1A0PJW8 107 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 PHYHO14832 338 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 CDK1P06493 297 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 ITGA5P08648 1049 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 CST2P09228 141 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 HOXB1P14653 301 aaPredicted RBP14.85□□□□□ -0.03
CMTM3-208ENST00000564247 MYL12AP19105 171 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 PCBD1P61457 104 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 SLC18B1Q6NT16 456 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 SLC16A14Q7RTX9 510 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 DPY19L4Q7Z388 723 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 CCDC36Q8IYA8 594 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 LRRC18Q8N456 261 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF433Q8N7K0 673 aaPredicted RBP14.85□□□□□ -0.03
CMTM3-208ENST00000564247 RELL2Q8NC24 303 aaPredicted RBP14.85□□□□□ -0.03
CMTM3-208ENST00000564247 OR1K1Q8NGR3 316 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms